Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04444 ATGGCTTCAAAACCACCACCACTGTCCCTCCTCTTCATTGCTCTCTCCATGCTCTCTTCCACCACCACCACCATCAGCTCCGGCCCCGGTATCGCCATCTACTGGGGCCAAAACGGCAAAGAAGGCACCTTACAACAAGCATGCGCCACAAACAACTACAAAATCGTAATCCTCGCATTTCTTACCGTCTTTGGCAGCGGCCGAACTCCGAAATGGAACTTTGCCGGCCACTGTGGCGATTGGAGCCCCTGCACCAAACTAGCCCCACAAATCCACTACTGCCAGAGCCAAAACATCAAGGTGTTCCTCTCCCTCGGCGGCGGCATCGGACACTACTCTCTCTCCTCGCCGCAAGACGCTAGGGAAGTTGCGCTCTATCTTTTTGAAAGCTTCCTCAGTGGCCAACACGGACCACTGGGAACCGTGGCATTAGATGGCATTGACTTTGACATCGAAGAAGGGTCAAATCTTTTCTACGATGACTTAGTCAAAGCCATCAATGCATTCTCCACAAAGGAGAAAAGAATTTACCTATCTGCGGCGCCGCAATGTCCGTACCCAGATCACTACCTCGATAAAGCAATCAAAACTGGATTATTTGATTATATTTGGGTTCAATTCTATAACAACCCTCCATGCCAATACTCAAATGGAAACCCTAAGAAACTTTTCGAGTATTGGGACACGTGGACATCGTCGGTTTTGCCGAATAACACTGTCCTTTTGGGGCTTCCGGCGGCGCCTCATGCTGCCGGAAGTGGGTTCGTAGCTGCTGAGGTTGTGGCGGATGAAATTCTTCCGCACATAAGACATGGTTCAAACTATGGAGGGGTTATGCTTTGGAGCAGATACTATGATGTTCAAACCAACTTCAGTGAGAAGATTAAGGGTAGCTTGATGATGAGATCTGCGTTGAAGTTAGTGAAAGCAATTGGAGATGCAATATATGAAGGCCTGTTTTCCATTTTGAACCGTCCTTATGTGCCTAAATCTGCTTCACTTAGGGCTGATGTTTGA 1017 0.4838 MASKPPPLSLLFIALSMLSSTTTTISSGPGIAIYWGQNGKEGTLQQACATNNYKIVILAFLTVFGSGRTPKWNFAGHCGDWSPCTKLAPQIHYCQSQNIKVFLSLGGGIGHYSLSSPQDAREVALYLFESFLSGQHGPLGTVALDGIDFDIEEGSNLFYDDLVKAINAFSTKEKRIYLSAAPQCPYPDHYLDKAIKTGLFDYIWVQFYNNPPCQYSNGNPKKLFEYWDTWTSSVLPNNTVLLGLPAAPHAAGSGFVAAEVVADEILPHIRHGSNYGGVMLWSRYYDVQTNFSEKIKGSLMMRSALKLVKAIGDAIYEGLFSILNRPYVPKSASLRADV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04444 338 Gene3D Glycosidases 29 300 - -
Arst5g04444 338 Pfam Glycosyl hydrolases family 18 31 285 IPR001223 GO:0005975
Arst5g04444 338 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 144 152 IPR001579 GO:0004553|GO:0005975
Arst5g04444 338 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 302 IPR001223 GO:0005975
Arst5g04444 338 PANTHER ENDOCHITINASE 14 296 - -
Arst5g04444 338 SUPERFAMILY (Trans)glycosidases 26 294 IPR017853 -
Arst5g04444 338 CDD GH18_hevamine_XipI_class_III 29 297 IPR045321 -
Arst5g04444 338 FunFam Acidic endochitinase SE2 29 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04444 Arst-Chr5 105741703 105742719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04444 10 299 Glycoside Hydrolase AT5G24090 49.829 6.87e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04444 K01183 - gmx:547449 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04444 5 105741703 105742719 Arst9g04075 9 115868687 115870050 PCT