Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03157 ATGGGGGCTGGTATTTCTTTGTCAACTTCAAACAAGTGTGATTATGATGATGGAAAGCCAGGTCTTGGGGACATACCAGAGAGCTGCATATCAAGGTTGCTGATGAATCTGGATCCACCAGAAATATGCCAACTGGCTAGAGTGAACCGCGCTTTTCACAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAGTTGCCACAAACCTACAAGTTCCTTGCCAAAAAAGTCTTTGCTCAACACAATATTATTGCTTCTATGACTAAGAAAGACATTTATACAAAACTATGTTTACCCAATCGCTTCGATGCTGGCACCAAGGAAGTTTGGTTGGATAAATGGAGCGGACAAATTTGTTTGTTCATGTCATCCAAGTCCTTCAACATAACAGGAATAGATGATAGAAGATATTGGAATTATATTCCAACTGAAGAATCCAGGTTCAAGAGCGTTGCCTATCTTCAACAAATGTGGTGGGTTGAGGTGGTGGGGGAGCTAGAGTTTGAATTCCCTGTGGGCAGTTACACCCTATTTTTCAGACTCCAATTGGGCATGGCCTCTAAAAGAAAGGGCCGCCGTGTGTGCAACGTGGACCAAGTCCATGGCTGGGACATCAAGCCCGTCCGATTTCAACTCTCCACATCACACGGCCATCTTTCTCACTCAGAGTCTTATTTGACTAGCCCAGGGGAGTGGATCCACTACCGTGTTGGAGATTTTATTGTTGATAGGCCCAATGAGCCCACTAAACTGAAGTTCTCTTTGGCCCAAATTGATTGCACTCACACCAAAGGTGGCCTCTGCATAGATGGTGCCATCATCTGCCCAACCCAGTTTAGCCACAAAATTATACTCTTCTAG 861 0.4472 MGAGISLSTSNKCDYDDGKPGLGDIPESCISRLLMNLDPPEICQLARVNRAFHRASSADFVWESKLPQTYKFLAKKVFAQHNIIASMTKKDIYTKLCLPNRFDAGTKEVWLDKWSGQICLFMSSKSFNITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVVGELEFEFPVGSYTLFFRLQLGMASKRKGRRVCNVDQVHGWDIKPVRFQLSTSHGHLSHSESYLTSPGEWIHYRVGDFIVDRPNEPTKLKFSLAQIDCTHTKGGLCIDGAIICPTQFSHKIILF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03157 286 Pfam Phloem protein 2 118 276 IPR025886 -
Arst9g03157 286 SUPERFAMILY F-box domain 17 79 IPR036047 GO:0005515
Arst9g03157 286 Gene3D - 16 97 - -
Arst9g03157 286 PANTHER F-BOX PROTEIN PP2-A15 8 281 - -
Arst9g03157 286 CDD F-box_AtSKIP3-like 22 67 - -
Arst9g03157 286 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03157 Arst-Chr9 109144126 109147304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03157 - - gmx:100795463 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04197 5 104156080 104160283 Arst9g03157 9 109144126 109147304 ECH
Arst9g03157 9 109144126 109147304 Arst9g03157 9 109144126 109147304 ECH
Arst5g04197 5 104156080 104160283 Arst9g03157 9 109144126 109147304 PCT