Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04197 ATGGGGGGTGCTAGTTCCTCAATTAGTGTAGCAGAAATTGAGGATGTTGTTTCAGAATCAACAGGGCTTGGTGACATTCCAGAGAGCTGCATCTCATTCATTATGAAGAGTTTTGATCCAAAAGAGATTTGCCAATTGGCTAAAGTGAACAAAACTTTTCATAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAATTGCCACAATCATATAAGTTCCTTCTCAATAAGATTCTTGGTGATAATAACAAAGAGGATCTAATTAGAACCATGTCCAAGAAAGAGGTTTATGCCAAACTATGTCGACCTAATTTCTTTGATGGTGGCACCAAAGAAGTTTGGTTGGATAGAAGCAGTGGACAAGTTTGTTTGTTCATCTCATCAAAGTCTTTCAAGATTACAGGAATTGATGACAGAAGATATTGGAATAATATTCCAACTGAAGAATCCAGGTTTAAAAGTGTTGCATACCTTCAACAAATGTGGTGGGTTGAAGTCTTGGGGGAATTAGACTTTGAATTTCCAAGAGGGAAATATAGCATTTTTTTCAGGCTTCATTTGGGAAAGACCTCAAACAGATTGGGCCGCAGAGTGTGCAACCTGGGCCAAGTCCATGGTTGGGACATCAAGCCCGTTAGATTTCAACTATCCACATCTGATGGCCAGAATTCACTTTCCCAGTGTTATTTGAGTGGGCCAGGAGAGTGGACCCATTATCCTGTTGGAGATTTTGTCATTGATAAGCCCAATGGGCCCACAACCATCAAGTTTTCCCTGGCCCAAATTGATTGTACTCACACAAAAGGCGGGCTTTGCATAGATGGGGCAGTGATTTGCCCAACCCAGAATACAAAACAATTTTGA 864 0.4086 MGGASSSISVAEIEDVVSESTGLGDIPESCISFIMKSFDPKEICQLAKVNKTFHRASSADFVWESKLPQSYKFLLNKILGDNNKEDLIRTMSKKEVYAKLCRPNFFDGGTKEVWLDRSSGQVCLFISSKSFKITGIDDRRYWNNIPTEESRFKSVAYLQQMWWVEVLGELDFEFPRGKYSIFFRLHLGKTSNRLGRRVCNLGQVHGWDIKPVRFQLSTSDGQNSLSQCYLSGPGEWTHYPVGDFVIDKPNGPTTIKFSLAQIDCTHTKGGLCIDGAVICPTQNTKQF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04197 287 SUPERFAMILY F-box domain 17 102 IPR036047 GO:0005515
Arst5g04197 287 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
Arst5g04197 287 Pfam Phloem protein 2 122 280 IPR025886 -
Arst5g04197 287 CDD F-box_AtSKIP3-like 23 68 - -
Arst5g04197 287 PANTHER F-BOX PROTEIN PP2-A15 14 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04197 Arst-Chr5 104156080 104160283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04197 - - gmx:100816360 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04197 5 104156080 104160283 Arst9g03157 9 109144126 109147304 ECH
Arst5g04197 5 104156080 104160283 Arst5g04197 5 104156080 104160283 ECH
Arst5g04197 5 104156080 104160283 Arst9g03157 9 109144126 109147304 PCT