Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03084 ATGAAGCACTCTCCAAAACCTTGCTACGTGATTGGTGTGATATCCGTGGTTGTGATACTGGGATCAGTAGCAGAATGCAGAAGATTTAACGGCATTGAATATCCTGCAATCAACTGCAGAAAGCACAGTGCGGTATTGACTGATTTTGGTGGCGTTGGTGATGGAAAAACTTCCAACACAAAGGCATTTAAATATGCAATAAGCAACCTGAGCCACTATGCATCTGATGGTGGTGCACAGCTTGTTGTGCCACCTGGCAAATGGCTCACTGGAAGCTTTAATCTCACAAGCTATTTCACTCTCTTTCTCCAAAAGGGTGCTCTCATTCTTGCATCTCAGGATGAATCAGAATGGCCTCCACTTCCTGTTCTACCGTCTTATGGAAGGGGAAGAGATGCTCCTGATGGAAGATTTAGCAGCCTCATTTTTGGAACTAACCTCACTGATGTTGTGATCACCGGTGCTAATGGCACAATTGACGGGCAAGGGTCATATTGGTGGACCAAGTTCAAACAGAACCAAACCAAACTGACTAGACCATACTTGATAGAGATCATGTACTCTAATCAAATCCAGATTTCAAATCTCACTCTGCTCAATTCTCCATCCTGGTTTGTTCATCCGATATACAGCAGTAATATAATAATTCAAGGGCTTACGATTGTTGCACCAGTTGACTCTCCCAACACAGATGGAATAAACCCAGATTCATGCAGAAACACTAGGATTGAAGACTGCTACATTGTATCGGGAGATGACTGCATTGCAGTGAAGAGTGGGTGGGATGAATACGGAATCAAATTCGGGAAGCCAACGGAACACGTGATCATCAGGAGACTGACATGCATATCCCCCGACAGCGCCATGATTGCATTAGGCAGTGAAATGTCCGGTGGCATCCGAGATATGAGGGCTGAAGACATCACGGCCATCAACACGCAATCGGCGGTTAGAATCAAGACAGCAATTGGCAGAGGAGGGTATGTTAAGGACATATTTGTCAAGGGAGCTCAATTGCACACCATGAAGTATGTCTTCTGGATCACCGGTTCATATGGCTCGCATCCTGATAATGGTTTTGATCCAAACGCGCTTCCTCAAATCACTGGGATAAACTACAGAGACTTCACTGCTGACAATGTCACATACTCAGCAAGACTCGAAGGCATCTCCAAGGACCCCTTTAGTGGAATATGCATTTCAAATGTCGATATTCGACTCAGTCAAGAGAAGAAGAAGCTTCAATGGAATTGCACGGATGTCTCTGGAGTTACAAAAAATGTCACTCCTCAGCCTTGTGATTTGCTTCCTCTCAAGACAGAAGCCCATGACTGTCCTTATCCAACTGACAAACTCCCCATTGATAGACTTCAACTCCAGACTTGTTCACTTTAA 1395 0.4459 MKHSPKPCYVIGVISVVVILGSVAECRRFNGIEYPAINCRKHSAVLTDFGGVGDGKTSNTKAFKYAISNLSHYASDGGAQLVVPPGKWLTGSFNLTSYFTLFLQKGALILASQDESEWPPLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGANGTIDGQGSYWWTKFKQNQTKLTRPYLIEIMYSNQIQISNLTLLNSPSWFVHPIYSSNIIIQGLTIVAPVDSPNTDGINPDSCRNTRIEDCYIVSGDDCIAVKSGWDEYGIKFGKPTEHVIIRRLTCISPDSAMIALGSEMSGGIRDMRAEDITAINTQSAVRIKTAIGRGGYVKDIFVKGAQLHTMKYVFWITGSYGSHPDNGFDPNALPQITGINYRDFTADNVTYSARLEGISKDPFSGICISNVDIRLSQEKKKLQWNCTDVSGVTKNVTPQPCDLLPLKTEAHDCPYPTDKLPIDRLQLQTCSL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03084 464 SUPERFAMILY Pectin lyase-like 39 459 IPR011050 -
Arst9g03084 464 PANTHER PECTIN LYASE-RELATED 18 455 - -
Arst9g03084 464 Pfam Glycosyl hydrolases family 28 141 422 IPR000743 GO:0004650|GO:0005975
Arst9g03084 464 Gene3D - 29 431 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03084 Arst-Chr9 108294589 108302035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03084 32 464 Glycoside Hydrolase AT3G48950 70.023 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03084 - - ahf:112777338 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03084 9 108294589 108302035 Arst9g03084 9 108294589 108302035 ECH
Arst5g04399 5 105403726 105406710 Arst9g03084 9 108294589 108302035 PCT