Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03052 ACTCGATCCATTAACATCACCCTCTCACGCCCCAGTTCCGGATCTGCACCTCACAGGCCGCAAACTTTCTTAAAGCCTCCAACTTTTGCTTCCAAAGTGTTCCAGCCACAAGGGAACAATGACGAGTCCTTCAAAGCTTCCTTCACAACCTGCCACGTCATCGACGCTAGGAAACCTACACCTACGGAAGTTGTGCCCGTCTCACCCGAGGATGACCAAAAGATTGAGGAAGAGTTGCAGCACTTGCGTGGCTTACAACAGCTTGGTGACACTGCTGTCGGAATGTGGTCAAAGCCTACGTTTAGGAGAAAGACTAAGATTGTTTGCACCATTGGGCCTTCTACGGATACAAGGGAAATGATTTGGAAGCTGGCTGAGGCTGGGATGAATGTTGCGCGTTTGAATATGTCTCATGGTGACCATGCTTCTCATCAGAAAGTTATCGATTTGGTAAAGGACTATAATGCACAATCCAAGGATAATGTAATTGCAATAATGCTCGACACCAAGGGTCCTGAGGTTAGGAGTGGGGACCTGCCACAGCCAATTACATTAGAACCTGGGCAAGAGTTCACTTTCACTATCCGGAGGGGTGTCGGAACCACAGATTGTGTTAGCGTTAACTATGATGATTTTGTTAATGATGTAGCAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCATTGATGGTAAAGTCTAAGACCGAGGATTCTGTAAAATGTGAAGTAGTTGATGGAGGAGAGCTTAAATCGAGGAGACATTTGAATGTTAGAGGAAAAAGCGCAACATTGCCTTCAATCACTGAGAAGGACTGGGATGACATTAAATTTGGAGTGGACAACCAAGTTGACTTTTATGCCGTTTCCTTTGTTAAGGATGCACAAGTAGTTCATGAACTGAAGAACTATCTGAAAAGCTGTGGTGCCGATATACATGTCATTGTAAAAATTGAAAGTGCAGACTCCGTTCCGAACCTGCATTCAATAATTACAGCATCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGGGCTGAGCTACCTATTGAGGAAGTTCCACTTTTGCAGGAGGAGATAATCAGAATATGCCGTAGCATGGGAAAGGCTGTGATTGTTGCAACAAATATGCTGGAAAGCATGATTGTTCACCCAACTCCAACCAGAGCAGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCTGATGGAATAATGCTTTCTGGTGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCATTACGGACAGAAGCCACTATACCAGGTAGTCAGATGCCACCTAATATTGGTCAAGGATTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCAACCATGATGTCCAACACCCTTGGAACCTCAACTGTTGTCTTCACTAGATCAGGCTTCATGGCTATTCTTCTAAGCCACTATCGACCAACTGGCACCATATTTGCTTTTACAGACCAGAAGCGGATACAGCAGCGGCTGGCTTTGTATCAAGGAGTTTGTCCTATATACATGGAATTCTCTGATGATGCTGAAGAGACATTCAAAAGAGCCTTGGATTTGTTGCAGAGGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGAAGACAGCCCATATGGAGGTTCCAATCCACTCACAACATCCAGGTTAGAACAGTGTAA 1719 0.4474 MSQVVATRSINITLSRPSSGSAPHRPQTFLKPPTFASKVFQPQGNNDESFKASFTTCHVIDARKPTPTEVVPVSPEDDQKIEEELQHLRGLQQLGDTAVGMWSKPTFRRKTKIVCTIGPSTDTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKDYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLEPGQEFTFTIRRGVGTTDCVSVNYDDFVNDVAVGDMLLVDGGMMSLMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSVPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGSQMPPNIGQGFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPTGTIFAFTDQKRIQQRLALYQGVCPIYMEFSDDAEETFKRALDLLQRQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRTV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03052 578 PRINTS Pyruvate kinase family signature 167 183 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 PRINTS Pyruvate kinase family signature 398 416 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 PRINTS Pyruvate kinase family signature 291 305 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 PRINTS Pyruvate kinase family signature 348 372 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 PRINTS Pyruvate kinase family signature 373 397 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 PRINTS Pyruvate kinase family signature 321 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 PRINTS Pyruvate kinase family signature 417 433 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 ProSitePatterns Pyruvate kinase active site signature. 319 331 IPR018209 GO:0004743|GO:0006096
Arst9g03052 578 FunFam Pyruvate kinase 274 439 - -
Arst9g03052 578 Gene3D - 451 578 IPR036918 -
Arst9g03052 578 PANTHER PYRUVATE KINASE 83 556 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 FunFam Pyruvate kinase 179 272 - -
Arst9g03052 578 Pfam Pyruvate kinase, barrel domain 109 445 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 MobiDBLite consensus disorder prediction 1 26 - -
Arst9g03052 578 SUPERFAMILY PK C-terminal domain-like 427 578 IPR036918 -
Arst9g03052 578 Gene3D - 111 436 IPR040442 -
Arst9g03052 578 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 100 443 IPR015813 GO:0003824
Arst9g03052 578 Gene3D - 179 272 IPR015806 GO:0004743|GO:0006096
Arst9g03052 578 NCBIfam pyruvate kinase 109 578 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst9g03052 578 MobiDBLite consensus disorder prediction 1 25 - -
Arst9g03052 578 FunFam Pyruvate kinase 440 559 - -
Arst9g03052 578 Pfam Pyruvate kinase, alpha/beta domain 466 558 IPR015795 -
Arst9g03052 578 SUPERFAMILY PK beta-barrel domain-like 178 269 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03052 Arst-Chr9 107969070 107973523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03052 K00873 - gmx:100818193 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03052 9 107969070 107973523 Arst9g03052 9 107969070 107973523 ECH
Arst5g04443 5 105735575 105740158 Arst9g03052 9 107969070 107973523 PCT