Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04443 ATGGCTCAGATTGTGGCAACAACACGATCCATTCAGAGCACCCTTTTGTGCCCCACTTCAGGATCTGCAAATGAAAGGGCGCGTAATCTCTTAAAGCCTCCAACTTTTTCCTCCAAGGTTTTCTCATCAAATGGGATCAACAAGTGCCCCCAAGATGCATTCAGAAGCTGCAGGATCAATGCGAGGAAATCTGCATCTGTTGAAGTTATCCCTGTCTCCGCTGAAGATGATCCAAAGATTGAGGAGCAATTGCGTGGTGTGCCGCAACTCCTTGATGCTTCGAATGGAATGTGGTCGAAGCCCACGTTTAGGCGCAAGACTAAGATAGTTTGTACCATTGGTCCTTCCACCAATACCAAGGAAATGATCTGGAAGCTGGCTGAGGCCGGCATGAATGTCGCTCGCCTCAATATGTCTCATGGAGACCATGCTTCACATCAGAAAGTTATTGACTTGGTTAAAGAATATAATGCACAAGCAAAGGACAATGTAATTGCAATTATGCTTGATACTAAGGGTCCTGAGGTGAGGAGTGGGGATCTGCCACAACCAATCATGCTATCAACTGGACAGGAATTCACTTTTACTATCCAAAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTATGATGATTTCGTCAATGATGTGGAACCTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCGTTGATGGTAAAATCTAAGACAGAAGATTCCGTTAAATGTGAAGTTGTTGACGGGGGAGAGCTTAAGTCAAGAAGGCATTTAAATGTTAGAGGAAAAAGTGCAACACTTCCTTCCATCACTGAGAAGGATTGGGATGATATCAAATTCGGAGTGGATAACCAAGTTGATTTCTATGCTGTCTCCTTTGTTAAGAGTGCTGAAGTTGTGCATGAACTGAAGAATTATTTGAAAAACTCTGGAACTGATATACATGTCATCGTAAAGATTGAAAGTGCAGACTCTATACCAAATTTGCATTCCATTATCACTGCGTCTGACGGGGCTATGGTTGCCAGAGGAGATCTTGGTGCTGAGCTTCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAACTTGTGCCGTAGCATGGGAAAAGCTGTTATTGTGGCCACAAATATGCTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCGGAAGTATCAGACATAGCAATTGCTGTTCGAGAAGGTTCTGATGCAATAATGCTGTCTGGAGAAACTGCCCACGGAAAGTATCCGCTAAAAGCTGTGAAAGTAATGCACACAGTTGCGTTACGTACAGAGGCTACTATACCAGGGGGTCAAATGCCGCCTAATATCGGTCAGGTGTTCAAGAACCACATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCTAACACTCTTGGCACTGCAACCGTCGTCTTTACGAGAACAGGTTTCATGGGCATCCTACTGAGCCACTATCGACCTTCTGGGACCATATTCGCCTTTACTGATGATAAACGAGTACAACAGAGATTGGCACTGTATCAAGGAGTCTGCCCTATATACATGGAATTTTGCGATGATTCTGAAGCGACCTTCAGACGAGCCTTGGATTTGTTGAAGAATCAAGGAATGGTGAAAGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCTATATGGAGGTCCCAAACCACACACAATATCCAAGTTCGGAAAGTGTAA 1725 0.4412 MAQIVATTRSIQSTLLCPTSGSANERARNLLKPPTFSSKVFSSNGINKCPQDAFRSCRINARKSASVEVIPVSAEDDPKIEEQLRGVPQLLDASNGMWSKPTFRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQAKDNVIAIMLDTKGPEVRSGDLPQPIMLSTGQEFTFTIQRGVGTADCVSVNYDDFVNDVEPGDMLLVDGGMMSLMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKSAEVVHELKNYLKNSGTDIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKYPLKAVKVMHTVALRTEATIPGGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTATVVFTRTGFMGILLSHYRPSGTIFAFTDDKRVQQRLALYQGVCPIYMEFCDDSEATFRRALDLLKNQGMVKEGEEVALVQSGRQPIWRSQTTHNIQVRKV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04443 574 Gene3D - 175 268 IPR015806 GO:0004743|GO:0006096
Arst5g04443 574 Pfam Pyruvate kinase, alpha/beta domain 464 555 IPR015795 -
Arst5g04443 574 Gene3D - 107 432 IPR040442 -
Arst5g04443 574 Pfam Pyruvate kinase, barrel domain 105 440 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 NCBIfam pyruvate kinase 105 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 96 439 IPR015813 GO:0003824
Arst5g04443 574 FunFam Pyruvate kinase 270 435 - -
Arst5g04443 574 FunFam Pyruvate kinase 175 268 - -
Arst5g04443 574 SUPERFAMILY PK C-terminal domain-like 423 574 IPR036918 -
Arst5g04443 574 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 PRINTS Pyruvate kinase family signature 163 179 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 FunFam Pyruvate kinase 436 555 - -
Arst5g04443 574 Gene3D - 447 574 IPR036918 -
Arst5g04443 574 PANTHER PYRUVATE KINASE 89 552 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g04443 574 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Arst5g04443 574 SUPERFAMILY PK beta-barrel domain-like 174 265 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04443 Arst-Chr5 105735575 105740158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04443 K00873 - gmx:100815822 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04443 5 105735575 105740158 Arst5g04443 5 105735575 105740158 ECH
Arst5g04443 5 105735575 105740158 Arst9g03052 9 107969070 107973523 PCT