Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02354 ATGTCTCGAATACTCTTCACTACATGGAACAAGCACAGAAACAAGCTTCATCCCAACCCAAAAATCCTTTCTTCTTCTCCTTCTTCTTCTTCACATGCCTACTTCGCCCTTTCGCCCCATCATCATCATCAGCAGCAGCAGCGTCACCGCGTCCTCACCAACACCAGCACTTTCTTGTTCTACCATAGGCTACTCCAGCACCGCCAAAAATGGGGCCGTGGAGGCTCGGACGACCCGATTACCCGGTCCAGGAGGATCCGAGCCGATCCGAATTGCCCACGCTGCTCCAGGGACATGATTGTAATTGACAACCTCAAGCTATCAACTCGCCAGGGAGGTCACCAATTCAATGGTACTGTGAACCTTTGCCCCAACTGTAACGCTGCCTATTACTTCAGCCCTTATGGCGTTGCGCCTCTTCAAGGTAGCTTTTTGGAGATTGGGGCTCAGAGGGTCTCTGAAAAAAACGATCTTGATGATGATGATGATGTTGATTTTGATTCTACTAAGGTGCCTAGGAGAATCAATGGGTTTGGTGGTAGAGTGTTGAATAGTAATGGTGGTGGTGGTGGTGATGGGGATAGTAATGCACCTGGTTCAGGTGATGGGAATGGTGGTGGTGGTGGTGTTGCTGTGCATAGTCCTCCAGGGCCACCTTTTGCTCCTGGTGTTAATGTTATAAGGGCTTCTGGGCCCCGAGAAGGTGGTTCCGGTGGCAGCAGTGGAAGTGAGAAGAGTTCATGGGGTGGTTCCAATTTGGGGAGGGACTTGCCAACTCCAAAAGAGATTTGTAAGGGTCTTGACAAGTTTGTAATTGGTCAGGACAGGGCCAAAAAGGTTCTATCAGTAGCTGTTTATAACCACTACAAAAGAATATACCATGCTTCTCAACAGAAAGGGTCAGAGGCTGATTCTGGAATTCCAGAAGGATTAGATAATGATGATGTCGAGCTGGAAAAGAGTAATGTTCTCTTGATGGGTCCAACAGGGTCCGGGAAGACATTACTTGCTAAGACGCTAGCTCGGTTCGTGAATGTTCCATTTGTCATTGCTGATGCAACAACCTTAACTCAGGCTGGTTATGTTGGAGAAGATGTGGAATCAATATTGTATAAATTACTGGCGGCAGCAGAGTTCAATGTTCAAGCAGCTCAACAAGGGATAGTCTACATTGATGAAGTGGACAAGATAACTAAGAAGGCTGAGAGCTTAAATATTAGCCGAGATGTTTCAGGCGAGGGTACTGTGAGTAAACTTGGAAACTAATATCGGACTGCACTATTGATAATCAGTTTATCAATAATAAATGTTCCTGAGAAAGGAGCAAGGAAACATCCACGAGGTGATAATATACAGATCGACACAAAGAATATTCTTTTTATATGTGGAGGTGCCTTCATTGATCTTGAAAAAACAATTTCAGAGAGACGACATGATTCTTCCATTGGTTTTGGAGCACCAGTTCGTGCCAATATGAGGACTGGTCAACTAACAAATGCAGCCATAGCATCATCTTTACTTGAGTCGGTGGAAAGTGCTGATCTTATTGCATATGGTCTCATACCAGAGTTTATTGGACGATTTCCGATTTTAATTAGCTTGTCAGCTTTAACTGAAGAACAGCTTATGCAGGTTCTCTCAGAACCGAAAAATGCACTTTCTAAGCAGTACAAGAAATTATTTAGCATGAATAATGTCAAACTACACTTCACAGAGAAAGCTATGAGATTGATCGCCAAGAAAGCAATGGCAAAAAATACTGGCGCCAGGGGTTTAAGAGCCCTACTGGAAAACATTTTAACTGAAGCCATGTATGAGATTCCAGATGTCAAGACAGGAAACGAACAGATTGATGCAGTTGTTGTCGATGAGGAATCAGTAGGATCAGTTAACGCCGTTGGTTGCGGAGGAAAAATTCTCCGCGGCGGAGGTGCTTTGGAGCGGTACCTTGCTAAGATGGAGGACTCAAAGGTTAAGGGTGATGTAGCTGAATCTGACTTGCAAGATGGGGAACAAGAGATCACATCAAGGGCAATGAGCATGTAA 2046 0.4477 MSRILFTTWNKHRNKLHPNPKILSSSPSSSSHAYFALSPHHHHQQQQRHRVLTNTSTFLFYHRLLQHRQKWGRGGSDDPITRSRRIRADPNCPRCSRDMIVIDNLKLSTRQGGHQFNGTVNLCPNCNAAYYFSPYGVAPLQGSFLEIGAQRVSEKNDLDDDDDVDFDSTKVPRRINGFGGRVLNSNGGGGGDGDSNAPGSGDGNGGGGGVAVHSPPGPPFAPGVNVIRASGPREGGSGGSSGSEKSSWGGSNLGRDLPTPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHASQQKGSEADSGIPEGLDNDDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGTVSKLGNXYRTALLIISLSIINVPEKGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRHDSSIGFGAPVRANMRTGQLTNAAIASSLLESVESADLIAYGLIPEFIGRFPILISLSALTEEQLMQVLSEPKNALSKQYKKLFSMNNVKLHFTEKAMRLIAKKAMAKNTGARGLRALLENILTEAMYEIPDVKTGNEQIDAVVVDEESVGSVNAVGCGGKILRGGGALERYLAKMEDSKVKGDVAESDLQDGEQEITSRAMSM 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02354 681 SMART AAA_5 319 459 IPR003593 GO:0016887
Arst9g02354 681 FunFam CLP protease regulatory subunit CLPX3 mitochondrial 251 535 - -
Arst9g02354 681 Gene3D - 252 535 IPR027417 -
Arst9g02354 681 FunFam ATP-dependent Clp protease ATP-binding subunit ClpX 536 638 - -
Arst9g02354 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 256 623 IPR027417 -
Arst9g02354 681 NCBIfam ATP-dependent protease ATP-binding subunit ClpX 254 627 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Arst9g02354 681 Pfam C-terminal, D2-small domain, of ClpB protein 537 607 IPR019489 -
Arst9g02354 681 CDD RecA-like_ClpX 258 534 - -
Arst9g02354 681 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 88 655 - -
Arst9g02354 681 Pfam AAA domain (Cdc48 subfamily) 319 530 IPR003959 GO:0005524|GO:0016887
Arst9g02354 681 SMART ClpB_D2_small_2 537 630 IPR019489 -
Arst9g02354 681 MobiDBLite consensus disorder prediction 156 259 - -
Arst9g02354 681 Gene3D - 536 635 - -
Arst9g02354 681 MobiDBLite consensus disorder prediction 236 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02354 Arst-Chr9 84496900 84503356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02354 323 439 Miscellaneous Gene Families AT3G02450 32.203 1.53e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02354 K03544 - qsa:O6P43_008314 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02636 5 80672124 80677521 Arst9g02354 9 84496900 84503356 PCT