Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02636 ATGTCACGAATCTTCTCGAGATGGAAGAAGGTGAAGGAAGTGGCGTCACTCTCCGACACCCATTTGGTCGATTCTCCGGTTAACATGACCCGAATTCGGAACCGAACCGGTTTGAATTACCGATTCAACCGTGTGCGCCCAATCTCGACCCATCTGAATCACCATATCCACATCACTGGCGGGGTCGGACATCATCGCCGGCGGGAGGCACTCGTCGGAGTTCAGGAGCGGTACAAATGGGACCGGGGTGGATCCGATGACAACCCGATCCGGAAGATTCGGGCAGAGGCAAACTGCCCGCGTTGCAGCAAGGACATGAACCTCGTATTCTCCAATCGCCATTTTCCGACCACATCAGCTTCTGATTCTGATTCAGGTTCTGGTTCGAGTTTGGCGCTACATGTTCCTGTGAATGGTGGTGGAGAAGGTGGTAGTGCTGGTTACCAAGCGGTGAATCTGTGTCCAACTTGCAAAACCGCTTATTACTTTAAACCTTTCAGCACTTCACCATTGCAAGGTACCTTTGTGGAGATTGGGAGGGTAACTAATAGTGGCAGCAATGGCAATGGCAATGGCAATGGCAGTGGCAAATCTCAATCTTCTAGGAGGATCACACATGGGAAGAATGGTGGTGGTGGTAAAGAGGGTGGTGGAAATAGTAGTGGTCATGGTGGTGGTGATGGTGAAGATTATGGTTCTAAGAATGGTGGTGGTGGTAGCTGGCTTGAGGCTTCATTGTGGGACACTTTAAGGTCCTACAATGGTGGTGGTGGTGGTGGTAATAGTGGGGAGCCACCTGAGGTATGGCCTCCACCACCAGGTGGTAACAATGTGAATGGTTTGGCTGTTCATAATCCTCCAGGGCCGCCTTTCATGCATGGGATGAATATCCGTGCTCCGGGGTCCCGGGAAGGTGGCTCTGGCGGTAGAGGTGGAGGTGGCGGAAATGAAGAAAAGACTTCTTGGGGAGGGTCTAATTTGGGTAAGGATTTGCCATCCCCAAAGGAGATTTGTAAGGGACTTGACAAGTTTGTAATTGGACAAGAGAGAGCTAAGAAGGTGCTTTCTGTAGCTGTTTATAACCACTATAAAAGAATATACCACTCCACTTTGCAGAAAGGGTCAGGGGCAGATCCTGGAGTTTCAGAGGGGTTAGATGATGACGATAATGTTGAGCTAGAAAAGAGTAATGTTCTTCTCATGGGTCCAACAGGATCAGGGAAGACGCTACTCGCGAAAACACTAGCTAGATTTGTGAATGTTCCGTTTGTCATTGCTGATGCAACAACCTTAACACAGGCTGGTTATGTTGGAGAAGATGTCGAATCAATACTGTACAAACTACTTGCGGCAGCAGACTTCAATGTTGCAGCAGCTCAACAAGGGATAATTTACATTGATGAAGTTGACAAGATAACTAAGAAGGCTGAGAGCTTAAATATCAGCCGGGATGTTTCTGGTCGTTGTTCACTATGCACGGTCCTGCTGTTATTAATAGTAAATGTTCCTGAGAAAGGGGCTAGGAAGCATCCGCGGGGTGATAACATACAGATGGACACAAAGAATATTCTTTTCATTTGTGGCGGAGCATTTATTGATCTTGAAAAGACAATTTCAGAGAGACGGCAAGATTCTTCTATTGGTTTTGGAGCCCCAGTTCGTGCCAACATGAGAGCTGGTGGAATAATTGATGCTGTACTAACATCATCTTTACTTGAGTCGGTGGAGAGTTCCGATCTTATTGCATATGGTCTCATACCAGAGTTTATTGGACGATTTCCCATCTTAGTGAGCTTGACAGCTTTAACTGAAGAGCAACTTATGCTGGTCCTATCAGAACCAAAGAATGCTCTTGGAAAGCAGTACAAGAAATTATTCAGCATGAATGATGTAAAGCTACACTTCACAGATAAAGCTCTCAGACTGATTGCACAGAAAGCAATGGCCAAAAATACCGGTGCCAGAGGTTTAAGAGCTCTACTCGAAAGTATTTTAACCGACACAATGTTTGAGGTTCCAGAACTTAAGACCGGAGATGAACGAATCGATGCAGTAGTTGTTGATGAAGAGTCAGTAGGATCAATAAACGCCCCTGGATGTGGAGGAAAAATTCTTCGTGGAGACAATGCTTTGGAGAAATACCTCGCTAAGATGAAGGATTCACAGGAAAATGTTAACTTAGCTGAATCAGACTCACAAGATGGAGATTCAGAGCTTTCATCAAGGGCCATGAGCTTGTAA 2241 0.4623 MSRIFSRWKKVKEVASLSDTHLVDSPVNMTRIRNRTGLNYRFNRVRPISTHLNHHIHITGGVGHHRRREALVGVQERYKWDRGGSDDNPIRKIRAEANCPRCSKDMNLVFSNRHFPTTSASDSDSGSGSSLALHVPVNGGGEGGSAGYQAVNLCPTCKTAYYFKPFSTSPLQGTFVEIGRVTNSGSNGNGNGNGSGKSQSSRRITHGKNGGGGKEGGGNSSGHGGGDGEDYGSKNGGGGSWLEASLWDTLRSYNGGGGGGNSGEPPEVWPPPPGGNNVNGLAVHNPPGPPFMHGMNIRAPGSREGGSGGRGGGGGNEEKTSWGGSNLGKDLPSPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHSTLQKGSGADPGVSEGLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAADFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGRCSLCTVLLLLIVNVPEKGARKHPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGIIDAVLTSSLLESVESSDLIAYGLIPEFIGRFPILVSLTALTEEQLMLVLSEPKNALGKQYKKLFSMNDVKLHFTDKALRLIAQKAMAKNTGARGLRALLESILTDTMFEVPELKTGDERIDAVVVDEESVGSINAPGCGGKILRGDNALEKYLAKMKDSQENVNLAESDSQDGDSELSSRAMSL 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02636 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 330 686 IPR027417 -
Arst5g02636 746 Gene3D - 325 600 IPR027417 -
Arst5g02636 746 Pfam AAA domain (Cdc48 subfamily) 394 595 IPR003959 GO:0005524|GO:0016887
Arst5g02636 746 MobiDBLite consensus disorder prediction 722 746 - -
Arst5g02636 746 NCBIfam ATP-dependent protease ATP-binding subunit ClpX 327 693 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Arst5g02636 746 FunFam ATP-dependent Clp protease ATP-binding subunit ClpX 601 704 - -
Arst5g02636 746 MobiDBLite consensus disorder prediction 182 206 - -
Arst5g02636 746 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 94 720 - -
Arst5g02636 746 SMART AAA_5 394 524 IPR003593 GO:0016887
Arst5g02636 746 CDD RecA-like_ClpX 332 599 - -
Arst5g02636 746 SMART ClpB_D2_small_2 602 695 IPR019489 -
Arst5g02636 746 Pfam C-terminal, D2-small domain, of ClpB protein 602 673 IPR019489 -
Arst5g02636 746 Coils Coil 711 731 - -
Arst5g02636 746 FunFam CLP protease regulatory subunit CLPX3 mitochondrial 325 600 - -
Arst5g02636 746 Gene3D - 601 701 - -
Arst5g02636 746 MobiDBLite consensus disorder prediction 252 333 - -
Arst5g02636 746 MobiDBLite consensus disorder prediction 723 746 - -
Arst5g02636 746 MobiDBLite consensus disorder prediction 182 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02636 Arst-Chr5 80672124 80677521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02636 K03544 - gmx:100805340 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02636 5 80672124 80677521 Arst5g02636 5 80672124 80677521 ECH
Arst5g02636 5 80672124 80677521 Arst9g02354 9 84496900 84503356 PCT