Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01504 ATGGCTCCTGCTATCACTACCCTCACTGCACCCAAAGCCACCGTGGTCAATGGCCGCACCGCTGGTAACCGTGCCTTTGTGACGTTCCTTGCCGGGAACGGTGACTATGTGAAAGGTGTTGTAGGGTTGGCAAAGGGTCTCAGAAAAACGAAAACAATGTACCCTCTTGTTGTTGCAGTGCTACCTGATGTTCCTGAAGAGCACAGAAAGATTCTGATATCTCAAGGGTGCATTGTTAGGGAGATTGAGCCTGTGTATCCACCTGAGAACCAGACACAGTTTGCTATGGCGTATTATGTCATCAACTACTCCAAGCTTCGTATTTGGGAGTTTGTGGAGTATAGCAAGATGATATATCTAGACGGTGACATTCAAGTGTTTGAGAACATTGACCACCTCTTTGACTTGCCGGATAATTACTTCTATGCTGTGATGGACTGTTTTTGTGAACCAACTTGGGGCCACACCTCCCAGTACAAGATCGGTTATTGCCAGCAATGCCCTGATAAGGTTCAATGGCCTAAGGACTTTGGTCCGAAGCCCCCACTTTATTTCAATGCTGGCATGTTCGTTTATGAACCAAATCTTGTTACCTATCATGACCTTCTTAAAACACTTCAAGTCACAAAACCTACATCCTTTGCAGAGCAGGACTTTTTGAACAATTACTTCAAGGATAAGTACAAGCCGATATCAAATGTTTACAACCTTGTGCTTGCCATGTTGTGGCGTCATCCTGAAAATGTTGAGCTTGACAAAGTTAAAGTAGTTCACTACTGTGCTGCTGGGTCTAAACCATGGAGGTATACTGGGAAGGAAGATAACATGGATAGAGAAGACATCAAGATGCTGGTGAAGAAATGGTGGGATATATATGAAGATGAGACTCTGGATTTCAATCATCCCGTCAATTCAGAAAGGTTTAAGATGGCTATTTTGGAGTCTGGTGGTGAAATCAAGTTTGTTCCCGCACCATCCGCAGCATAG 987 0.4428 MAPAITTLTAPKATVVNGRTAGNRAFVTFLAGNGDYVKGVVGLAKGLRKTKTMYPLVVAVLPDVPEEHRKILISQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDNYFYAVMDCFCEPTWGHTSQYKIGYCQQCPDKVQWPKDFGPKPPLYFNAGMFVYEPNLVTYHDLLKTLQVTKPTSFAEQDFLNNYFKDKYKPISNVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEDNMDREDIKMLVKKWWDIYEDETLDFNHPVNSERFKMAILESGGEIKFVPAPSAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01504 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 298 IPR029044 -
Arst9g01504 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 23 296 - -
Arst9g01504 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 296 IPR029044 -
Arst9g01504 328 FunFam Hexosyltransferase 22 300 - -
Arst9g01504 328 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
Arst9g01504 328 CDD GT8_Glycogenin 24 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01504 Arst-Chr9 22506734 22508353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01504 1 328 Glycosyltransferase AT1G56600 73.373 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01504 K18819 - gmx:100804007 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01504 9 22506734 22508353 Arst9g01504 9 22506734 22508353 ECH
Arst6g00779 6 6968712 6970745 Arst9g01504 9 22506734 22508353 ECH
Arst6g00650 6 5740347 5742279 Arst9g01504 9 22506734 22508353 PCT