Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00779 ATGGCACCTCCTGAGCTTGTTCCAACCGCCGCTGCTGCTTCCGCCTTCACCGCGAGAACTGCTTCCACACTCCCCAGGCGAGCCTACGTCACTTTCCTCGCCGGAAACGGTGACTACGTCAAAGGTGTTGTTGGACTGGTCAAAGGCCTCCGAAAGGTCAAGTCAGCTTACCCTCTGGTGGTGGCGATCCTCCCCGACGTGCCTGAGGAGCACCGTCAGATACTTGAGTCACAAGGTTGCATAGTCCGCCAGATCGAACCGGTTTACCCTCCTGAGAACCAGACTCAGTTCGCCATGGCCTATTATGTCATCAACTACTCCAAGCTCCGTATCTGGGAGTTTGTGGAGTACAGTAAGATGATATACTTGGATGGAGACATTGAGGTGTATGAGAACATAGATCACTTGTTTGATCTTCCAGATGGAAAGTTCTATGCTGTAATGGATTGCTTCTGCGAGAAGACATGGAGTCACAGCCCTCAATACAAGATCGGTTACTGCCAGCAGTGCCCTGACAAGGTGCAATGGCCTGAAGAGTTGGGTCAACCACCGTCCCTGTACTTCAACGCTGGCATGTTCGTGTTTGAGCCATCCATGGAAACTTACCACGACCTTCTCAGAAAACTCCAGATCACACCTCCTACTCCCTTTGCGGAGCAGGATTTCCTCAACATGTATTTCAAGGACATTTACGAGCCCATTCCCTCCGTTTATAACCTTGTTCTTGCCGTGCTCTGGCGCCACCCTGAAAATGTTGACCTTGATAAAGTCAAAGTTGTTCACTACTGTGCAGCGGGATCCAAACCATGGAGATATACCGGAAAGGAAGAAAATATGCAGAGGGAGGACATAAAGATGCTGGTGAAGAAATGGTGGGATATCTATCATGATACATCCCTGGATTACAGGAAACCGCCGCTATCCAGTGACGAAGCTGATCCATTGGTGCATGTAACTTCTGAGTCTCCCAAAGTCCCCTATCTCATGACGCCCACACCTGCATAG 1005 0.5015 MAPPELVPTAAAASAFTARTASTLPRRAYVTFLAGNGDYVKGVVGLVKGLRKVKSAYPLVVAILPDVPEEHRQILESQGCIVRQIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIEVYENIDHLFDLPDGKFYAVMDCFCEKTWSHSPQYKIGYCQQCPDKVQWPEELGQPPSLYFNAGMFVFEPSMETYHDLLRKLQITPPTPFAEQDFLNMYFKDIYEPIPSVYNLVLAVLWRHPENVDLDKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYHDTSLDYRKPPLSSDEADPLVHVTSESPKVPYLMTPTPA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00779 334 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 25 302 IPR029044 -
Arst6g00779 334 FunFam Hexosyltransferase 25 303 - -
Arst6g00779 334 CDD GT8_Glycogenin 27 295 - -
Arst6g00779 334 Pfam Glycosyl transferase family 8 31 273 IPR002495 GO:0016757
Arst6g00779 334 PANTHER GLYCOGENIN SUBFAMILY MEMBER 18 310 - -
Arst6g00779 334 SUPERFAMILY Nucleotide-diphospho-sugar transferases 29 301 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00779 Arst-Chr6 6968712 6970745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00779 6 334 Glycosyltransferase AT1G56600 70.149 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00779 K18819 - gmx:100809287 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00779 6 6968712 6970745 Arst6g00779 6 6968712 6970745 ECH
Arst6g00779 6 6968712 6970745 Arst9g01504 9 22506734 22508353 ECH