Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01165 ATGCCCAAGAATGTCTTGGACTTCAACGTCATATCCTCCATCCCCAACGCCGGCGTTTCTGAGGCCGTCGGCGGCTTCTTTGGCGCTGCCACTGGCATTATTGGTAACACAGTTGATAATGTCACTTCCGTCTTCAGCCAACAAATTTCCCTTAAGTTGATCAGTGCTACCAAGACTGATGGAAAGGGAAATGGGAAAATTGGAAAGGAAACTTATGTAGAGAATCATCTTCCAACCTTACCCACATTGGGAGCAAGGCAAGAAGCATTCGATATTCATTTTGATTATGATGCCGAGTTTGGAATTCCAGCAGCATTTTATCTCAGAAGCTACATGCAAACTGAATTCTTCCTCGTTAGTGTTACTCTTGAAGACGTTCCAAACCATGGAACCATTCACTTTGTTTGCAACTCATGGGTCTACAACTTCAAAAATTACAAAAACGACCGCATCTTCTTTATCAACAACGTGTTTTTACCCAGTGAAACACCTGCTGCACTATTGAAGTACAGAAAAGAAGAGTTGCAGAACTTAAGAGGAGATGGAACAGGGGAGCGCAAAGAATACGATAGGATTTACGATTATGATGTCTACAATGATTTAGGTAATCCAGATCGTGGTGAAAAGTATTCTCGCCCAATCCTTGGAGGCTCTTCCACTTATCCCTATCCTCGAAGAGTTAGAACTGGTAGAAAACCAACCAAAAAAGATCCTAAAAGTGAGACTCCACCAAGGGAGACTTATGTTCCAAGAGACGAAAATTTTGGTCACTTGAAATCATCTGACTTCCTCATATATGGAATCAAATCTTTGTCTCAAAACGTGTTGCCTCTTTTCGAATCGTTGATCTTCGATTTAGACTTCACACCGAATGAGTTTGATAGCTTCGACGAAGTACGAGAACTCTACGAAGGAGGAGTCAAACTGCCCACAGATATGCTGAGTAAAATTAGTCCCTTGCCGGCGCTCAAAGAAATATTTCGGACTGATGGCGAACAAACACTCAAATTCCCACCACCTCATGTAATCAGAGTTAGCAAATCTGCATGGATGACTGATGAAGAATTTGCAAGAGAAATGCTTGCTGGTGTAAATCCTTGTGTGATTCGACGTCTTCAAGAGTTCCCACCCCAAAGCACACTAGATGCTACCATCTACGGTGACCAAAACAGTAAAGTTTCAAAACAAGAGATGGAGACTAACCTAGATGGGCTCACAGTGGAACAGGCACTTAATGGTAATAGATTATTCATATTGGATTACCATGATGCCTTCATGCCATATCTAGAAAGGATCAACAAAATTGCAAAGGCTTATGCTACCAGAACATTCCTTTTCTTGAGTGAGAATGGGAAATTGAAGCCAGTTGCCATTGAGTTAAGTTTGCCACATCCTAGTGGAGATCAATATGGTGCTGTTAGTAAAGTCATCTTGCCTGCTTCCGAAGGTGTTGAAAGCACAATTTGGCTATTGGCCAAGGCTCATGTAATTGTCAACGACTCGTGTTATCATCAACTCATGAGCCACTGGTTAAACACACACGCAGTTATTGAGCCATTTGCCATAGCAACAAATAGGAATCTTAGTGTGCTTCACCCCATTAGTAAACTCCTACACCCTCATTATCGTGACACCATCAACATCAACGGACTTGCTCGTCAAGCACTAATCAATGCAGGTGGCATCATAGAGCAATCATTTTTGCCTGGCCCCAATTCCATAGAGATGTCTTCAGCTGTTTACAAGAATTGGGTATTCACAGACCAAGCTTTACCAGCTGATCTTGTTAAGAGGGGATTGGCCATTCAAGATCCTTCTTCACCTTATGGCCTTAACCTAGTGATAAAGGATTACCCTTATGCAGTTGATGGACTAGAGATATGGGATGCAATCAAGACATGGGTCCAAGACTATGTTTCTTTGTACTACCCTTCAGATGAAGCAGTTAAGAAAGATTCAGAACTGCAAGCATGGTGGAAGGAAGCTGTAGAGAGGGGTCATGAAGACTTAAAAGACAAGCCATGGTGGCCAAAAATGCAAAGCATTGAAGAATTGATTCAATGCTGCTCTATCATTATATGGACGGCTTCGGCGCTTCATGCCGCCGTTAACTTTGGACAGTATCCATATGGAGGTTACATCCTTAACCGTCCAACTCTAAGTAGAAGATGGATCCCGGAGAAGGGAACTAAAGATTATGATGAGATGGTGAAGAATCCTCAAAAGGCTTATTTGGGAACAATCACACCTAAGTATCAGACCCTTGTTGATCTCTCAGTGATTGAGATTTTGTCAAGGCATGCCTCTGATGAAGTGTACCTTGGGCAGAGGGAGAATCCTAACTGGACAAGTGACTCAAGGGCAATCCAAGCTTTCAACAAGTTTGGGAGCAAGTTGGCAGAGATTGAGGGTAAGATTAAAGAAAGGAACAAGGATTCCAGTTTGAGCAATAGGGTTGGACCGGTTGAACTTCCCTATACTTTGCTTCTTCCTTCTAGCACTGAAGGCTTAACTTTCAGAGGTATCCCTAACAGTATCTCCATCTGA 2547 0.4252 MPKNVLDFNVISSIPNAGVSEAVGGFFGAATGIIGNTVDNVTSVFSQQISLKLISATKTDGKGNGKIGKETYVENHLPTLPTLGARQEAFDIHFDYDAEFGIPAAFYLRSYMQTEFFLVSVTLEDVPNHGTIHFVCNSWVYNFKNYKNDRIFFINNVFLPSETPAALLKYRKEELQNLRGDGTGERKEYDRIYDYDVYNDLGNPDRGEKYSRPILGGSSTYPYPRRVRTGRKPTKKDPKSETPPRETYVPRDENFGHLKSSDFLIYGIKSLSQNVLPLFESLIFDLDFTPNEFDSFDEVRELYEGGVKLPTDMLSKISPLPALKEIFRTDGEQTLKFPPPHVIRVSKSAWMTDEEFAREMLAGVNPCVIRRLQEFPPQSTLDATIYGDQNSKVSKQEMETNLDGLTVEQALNGNRLFILDYHDAFMPYLERINKIAKAYATRTFLFLSENGKLKPVAIELSLPHPSGDQYGAVSKVILPASEGVESTIWLLAKAHVIVNDSCYHQLMSHWLNTHAVIEPFAIATNRNLSVLHPISKLLHPHYRDTININGLARQALINAGGIIEQSFLPGPNSIEMSSAVYKNWVFTDQALPADLVKRGLAIQDPSSPYGLNLVIKDYPYAVDGLEIWDAIKTWVQDYVSLYYPSDEAVKKDSELQAWWKEAVERGHEDLKDKPWWPKMQSIEELIQCCSIIIWTASALHAAVNFGQYPYGGYILNRPTLSRRWIPEKGTKDYDEMVKNPQKAYLGTITPKYQTLVDLSVIEILSRHASDEVYLGQRENPNWTSDSRAIQAFNKFGSKLAEIEGKIKERNKDSSLSNRVGPVELPYTLLLPSSTEGLTFRGIPNSISI 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01165 848 Gene3D PLAT/LH2 domain 1 158 - -
Arst9g01165 848 Gene3D - 348 481 - -
Arst9g01165 848 Gene3D - 259 347 IPR027433 -
Arst9g01165 848 MobiDBLite consensus disorder prediction 206 252 - -
Arst9g01165 848 PRINTS Lipoxygenase signature 504 521 IPR013819 GO:0016702|GO:0046872
Arst9g01165 848 PRINTS Lipoxygenase signature 524 544 IPR013819 GO:0016702|GO:0046872
Arst9g01165 848 PRINTS Lipoxygenase signature 486 503 IPR013819 GO:0016702|GO:0046872
Arst9g01165 848 SUPERFAMILY Lipoxigenase 159 848 IPR036226 -
Arst9g01165 848 ProSiteProfiles PLAT domain profile. 29 154 IPR001024 GO:0005515
Arst9g01165 848 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 157 848 IPR013819 GO:0016702|GO:0046872
Arst9g01165 848 FunFam Lipoxygenase 349 481 - -
Arst9g01165 848 Gene3D - 482 847 - -
Arst9g01165 848 PRINTS Plant lipoxygenase signature 124 142 IPR001246 GO:0016491
Arst9g01165 848 PRINTS Plant lipoxygenase signature 335 351 IPR001246 GO:0016491
Arst9g01165 848 PRINTS Plant lipoxygenase signature 189 205 IPR001246 GO:0016491
Arst9g01165 848 PRINTS Plant lipoxygenase signature 290 311 IPR001246 GO:0016491
Arst9g01165 848 PRINTS Plant lipoxygenase signature 374 393 IPR001246 GO:0016491
Arst9g01165 848 PRINTS Plant lipoxygenase signature 761 775 IPR001246 GO:0016491
Arst9g01165 848 PRINTS Plant lipoxygenase signature 439 463 IPR001246 GO:0016491
Arst9g01165 848 PRINTS Plant lipoxygenase signature 150 171 IPR001246 GO:0016491
Arst9g01165 848 PRINTS Plant lipoxygenase signature 222 241 IPR001246 GO:0016491
Arst9g01165 848 Pfam PLAT/LH2 domain 61 153 IPR001024 GO:0005515
Arst9g01165 848 PANTHER LIPOXYGENASE 44 848 IPR000907 GO:0016702|GO:0034440|GO:0046872
Arst9g01165 848 PANTHER LIPOXYGENASE 44 848 IPR000907 GO:0016702|GO:0034440|GO:0046872
Arst9g01165 848 ProSitePatterns Lipoxygenases iron-binding region signature 1. 504 518 IPR020833 GO:0016702|GO:0046872
Arst9g01165 848 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 1 157 IPR036392 GO:0005515
Arst9g01165 848 Gene3D - 159 258 - -
Arst9g01165 848 FunFam Lipoxygenase 483 847 - -
Arst9g01165 848 ProSitePatterns Lipoxygenases iron-binding region signature 2. 531 541 IPR020834 GO:0016702|GO:0046872
Arst9g01165 848 MobiDBLite consensus disorder prediction 234 252 - -
Arst9g01165 848 Pfam Lipoxygenase 167 831 IPR013819 GO:0016702|GO:0046872
Arst9g01165 848 Pfam Lipoxygenase 167 831 IPR013819 GO:0016702|GO:0046872
Arst9g01165 848 SMART LH2_4 1 155 IPR001024 GO:0005515
Arst9g01165 848 FunFam Lipoxygenase 159 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01165 Arst-Chr9 13285108 13344428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01165 1 848 Acyl Lipid Metabolism Gene Families AT1G55020 56.562 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01165 K15718 - gmx:100781402 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01472 8 23862701 23866416 Arst9g01165 9 13285108 13344428 PCT