Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00349 ATGGAAAGTAACCTACCAGTGATAGCAAAGAAAGTGTGGAACATAATACGTGTTGCCTTCTACATGTTAAGGAAGGGAATTTCAAAAGCCAAACTCATGTTAGAACTCAACATGGTTCTCAAACGCCGCCGCAAACTCGCCGGAAAAGCCATCGCCAACCTCATGATGTTCCACCACCACCAACACCCCGACATGCACCTCCAACAATTCTCCACCACCAGGGAGTACGAGTTCAGCTGCAGCAACACGCCCAATAACTTCTTCTCCAAGCTCCACCGCAAGAACAAGCTCTTCACGCGCTCCCACGCGCCTCACGAGTGCGACGACGACGTCATGACGGTTAGTGCTGTCAAGGCGGTGTTAGAGATCCTAAACAACAACAATGATAATGTGGCCGAGGCATCCCCGGCGCTACCGGGGTTCGCCCGGAGCCCTACCGTGAGTCAGTTAAGGGTAACGGATTCACCGTTTCTAATGAATGTCGACACAGAATACGATAAAGATCATCAAGTAGACAAGGCTGCGGAAGAATTCATTAAGAGGTTCTACAAAGAGTTGAGGAAGCAACCCTAA 573 0.4974 MESNLPVIAKKVWNIIRVAFYMLRKGISKAKLMLELNMVLKRRRKLAGKAIANLMMFHHHQHPDMHLQQFSTTREYEFSCSNTPNNFFSKLHRKNKLFTRSHAPHECDDDVMTVSAVKAVLEILNNNNDNVAEASPALPGFARSPTVSQLRVTDSPFLMNVDTEYDKDHQVDKAAEEFIKRFYKELRKQP 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00349 190 Pfam Cotton fibre expressed protein 169 189 IPR008480 -
Arst9g00349 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 4 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00349 Arst-Chr9 2965099 2965798 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00349 - - gmx:100802625 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00349 9 2965099 2965798 Arst7g02254 7 51868111 51868986 ECH
Arst5g03145 5 88495230 88495853 Arst9g00349 9 2965099 2965798 ECH
Arst9g00349 9 2965099 2965798 Arst9g00349 9 2965099 2965798 ECH
Arst7g02254 7 51868111 51868986 Arst9g00349 9 2965099 2965798 PCT