Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03145 ATGGAAATTGAAGCAAGGGCAGCACCAATGGTGGCAAAGAAGCTCTTGAACATTCTAAGAATAGTTATGGTCATGTTAAGAAAAGGTATATCAAAGAGCAAACTCATTTCCGAGTTCAATCTCTTGCTCAAGCGCGGAAAGATAGCAGCCAGCAACGCAATCTCCACCACTCTCACTCTCCACCATCACTACGCCGCCGCCTTCACTCGCCGCCGTTCCTCCTTCCGCAACAACAAAAACCTCTCCTTCTACCCTCGCGAATACCAATTCAGCTGCACTAGTAGCCCTGCCTTTAATTACCACAGCCGTCGCCACCATCGCTGCCACCACCACGAAGACGTTTCAACCCTATGTAAGGTTCTTGAGATGCTAAAAGATAACAACAACAATAGCAACTGTGAGATGGTGATGGATTCGCCATTGATGCCATTGCCAGGGTTTGGAAAAAGCCCTAAGCAGTTGAGGATCACTGATTCCCCTTTTCCTCTCAAAGACGAAGAAGATTTTGATGATGACGATGGTGGCAAAATTGATATTAAAGCTGAAGAGTTTATTAAAAGGTTTTATAAGAATCTTCACTCACAACACACAAATTCTCCTTATTATTACTCTTGGGACCGATAA 624 0.4439 MEIEARAAPMVAKKLLNILRIVMVMLRKGISKSKLISEFNLLLKRGKIAASNAISTTLTLHHHYAAAFTRRRSSFRNNKNLSFYPREYQFSCTSSPAFNYHSRRHHRCHHHEDVSTLCKVLEMLKDNNNNSNCEMVMDSPLMPLPGFGKSPKQLRITDSPFPLKDEEDFDDDDGGKIDIKAEEFIKRFYKNLHSQHTNSPYYYSWDR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03145 207 Pfam Cotton fibre expressed protein 176 195 IPR008480 -
Arst5g03145 207 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 7 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03145 Arst-Chr5 88495230 88495853 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03145 - - cave:132166157 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03145 5 88495230 88495853 Arst9g00349 9 2965099 2965798 ECH
Arst5g03145 5 88495230 88495853 Arst7g02254 7 51868111 51868986 ECH
Arst5g03145 5 88495230 88495853 Arst5g03145 5 88495230 88495853 ECH
Arst5g03145 5 88495230 88495853 Arst5g03145 5 88495230 88495853 PCT