Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00226 ATGGAACTTATTTCCGGTTTGCCCGAAGACTTGGCCCGAGACTGTTTGATTCGGGTCTCATACCAACAATTCCCAACGGTGGCATCGGTTTGCAAAAACTGGAAAGAGGAGGTTGAGTCGCCGGAGTTTCGCCGTCAACGCCGGCGCACCGGCATCTCACAGAAGCTCATCGTGATGGTTCAAGCACGATGTGACCCGGATAATGAACCCGGATCCGGTTCATCAAAGCGATTATATAACCCAGTTTACCGTCTCAGCGTGTTCGAACCGGTAACCGGTAACTGGAGCGAGTTGCCTCCTCCACCGGAGTTTGAATCCGGGCTACCCATGTTTTGTCGGGTCGCTAGCGTTGGGTCGGAGCTTATCCTATTGGGCGGGTTAGACCCAAATACATGGAAGGCTTCTGATTCCGTTTTGATTTATAACTTCATTACCGCGAAGTGGCGCCGGGGGACTCACATGCCTGGTGGGTCCCGCATGCTCTTTGCATGCGTGTCAGACTCGCGGCGAATGGTATTCGTCGCCGGTGGACACGACGACGAGAAAAATGCACTGCGATCCGCGCTGGCGTATGACGTGGCAGAGGATAAGTGGATATCCCTGCCCGACATGGCGGCGGAGCGCGACGAGTGCACGGCCTTGTTCCGCCACGGGCGACTGGCTGTCATCGGTGGTTATCGGACGGAAACGCAGGGTGTGTTTGAAAGGAGCGCGGAGGTTTTTGACGTTGCCACGTGGCAGTGGGGTCCAGTGATGGAGGAGTTTTTGGATTGCGCCACGTGTCCGAGAAACTCGACGGACGGTGGTGATGTGGACGGGAGAGTGATCATGTGTTGCGGCGAGGAGATAAAATCGAGGCAGGGTGGCACGTGGCAGAAGATGGGGAAGGTGCCGGTGGAGATACGGAACGTGGCGTACGTTGGAGCGTTGGATGGATGTGCCGTGGTGATTGGATCCAACGGTCACGGAGAGGCGCATGAAAGTTTCGTGTTTGATTTGAAGAGTTGTAATTGGAGAAAGGTTGAAACCCCAGAAAAATTCAGGGGGCATGTCCAAACAGGTTGTGTTTTGGAGATTTAA 1080 0.5472 MELISGLPEDLARDCLIRVSYQQFPTVASVCKNWKEEVESPEFRRQRRRTGISQKLIVMVQARCDPDNEPGSGSSKRLYNPVYRLSVFEPVTGNWSELPPPPEFESGLPMFCRVASVGSELILLGGLDPNTWKASDSVLIYNFITAKWRRGTHMPGGSRMLFACVSDSRRMVFVAGGHDDEKNALRSALAYDVAEDKWISLPDMAAERDECTALFRHGRLAVIGGYRTETQGVFERSAEVFDVATWQWGPVMEEFLDCATCPRNSTDGGDVDGRVIMCCGEEIKSRQGGTWQKMGKVPVEIRNVAYVGALDGCAVVIGSNGHGEAHESFVFDLKSCNWRKVETPEKFRGHVQTGCVLEI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00226 359 Pfam F-box domain 4 43 IPR001810 GO:0005515
Arst9g00226 359 Pfam Kelch motif 112 155 IPR006652 GO:0005515
Arst9g00226 359 Pfam Kelch motif 172 204 IPR006652 GO:0005515
Arst9g00226 359 CDD F-box_AtAFR-like 3 47 - -
Arst9g00226 359 PANTHER OS02G0208700 PROTEIN 2 359 IPR044595 GO:0080037|GO:2000762
Arst9g00226 359 Gene3D - 44 353 IPR015915 GO:0005515
Arst9g00226 359 SMART kelc_smart 171 218 IPR006652 GO:0005515
Arst9g00226 359 SMART kelc_smart 120 169 IPR006652 GO:0005515
Arst9g00226 359 SUPERFAMILY F-box domain 3 49 IPR036047 GO:0005515
Arst9g00226 359 SUPERFAMILY Kelch motif 80 343 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00226 Arst-Chr9 1873810 1875280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00226 7 198 Miscellaneous Gene Families AT4G33900 26.066 3.21e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00226 - - gmx:100796602 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g00226 9 1873810 1875280 Arst9g00226 9 1873810 1875280 ECH
Arst7g03186 7 77911205 77912721 Arst9g00226 9 1873810 1875280 PCT