Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g03186 ATGGAGCTTATTTCAGCTCTACCTGAGGACGTAGCCCGAGATTGCTTGATTCGGATCTCTTATCAAAACTTTCCAGCAGTTTCCTCTGTCTCCAAAGCCTGGAATACCGAGATCCAGTCGCCGGAGTTTCGCCGTAGAAGGACCGCCGCTAATCAAACTCAGAAAATACTTGTCGCCGTTCAATCCAGAGTTGACTCCGACGACAAACGTCGAACCGGCTTGCTGGTCAAGGCAGCAACGAACCCGGTTTACCAACTCAGCGTGTTGGAACCCAAAACTGGTAATTGGAGCGAGTTACCACCCGCACCGGAATTCCCAAACGGGTTACCCATGTTCTGTCGTATAGCCGGTGTAGGGTACGACCTTGTTGTTATTGGCGGGTGGGACCCAGAGTCTTGGAAAGCTTCCAATTCAGTTTTTATCTATAACTTTCTATCTGCCACGTGGCGACGTGGGGCCGACATGCCCGGTGGGCCCCGAACGTTCTTTGCGTGTGCATCGGATAACGATCGTACGGTCTACGTTGCTGGCGGCCACGACGACGAGAAGAATGCACTGAAATCCGTGTTGGCGTATGACGTGGCACGCGATGCATGGGCCGCGCTGCCTGATATGTCTAGAGAGCGTGACGAGTGCAAAGCCATCGTTCGGGGAGGACGCCTCTGCATAATTGGCGGCTACTGCACTGAAATGCAGGGCCGCTTTGAGAAGAGCTCAGAGGAGTTTGATGCTGCCACGTGTCAGTGGAGCCCAGTTGAAGAAGAGTTCTTGGATGCCGGCACCTGTCCTAGGACTTGCGTCGATGGCGGTGATGATGAGTTGTTCATTTGCCGAGATGGTGAGCTGGTGGTCTTAAAGCGTGACACGTGGCAGACGGTGGTAAAGGTGCCGGAGGAAATACGTAATGTTTCGTATATGGAAGCGCGGGAAGGAGCATTGTTGTTAATTGGATCAAGTGGTTTCGGACAACCACATATGGGTTTTTTGTTGGACTTGAAGAGTAGTAATTGGGCCAAATTATCGAGCCCAGAAAACTACACTGGCCATGTCCAATTTGGTTGCCTTTTGGAAATTTAG 1077 0.5172 MELISALPEDVARDCLIRISYQNFPAVSSVSKAWNTEIQSPEFRRRRTAANQTQKILVAVQSRVDSDDKRRTGLLVKAATNPVYQLSVLEPKTGNWSELPPAPEFPNGLPMFCRIAGVGYDLVVIGGWDPESWKASNSVFIYNFLSATWRRGADMPGGPRTFFACASDNDRTVYVAGGHDDEKNALKSVLAYDVARDAWAALPDMSRERDECKAIVRGGRLCIIGGYCTEMQGRFEKSSEEFDAATCQWSPVEEEFLDAGTCPRTCVDGGDDELFICRDGELVVLKRDTWQTVVKVPEEIRNVSYMEAREGALLLIGSSGFGQPHMGFLLDLKSSNWAKLSSPENYTGHVQFGCLLEI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g03186 358 SMART kelc_smart 121 169 IPR006652 GO:0005515
Arst7g03186 358 SMART kelc_smart 172 219 IPR006652 GO:0005515
Arst7g03186 358 CDD F-box_AtAFR-like 3 47 - -
Arst7g03186 358 PANTHER OS02G0208700 PROTEIN 2 358 IPR044595 GO:0080037|GO:2000762
Arst7g03186 358 SUPERFAMILY F-box domain 3 53 IPR036047 GO:0005515
Arst7g03186 358 SUPERFAMILY Kelch motif 81 339 IPR015915 GO:0005515
Arst7g03186 358 Pfam Kelch motif 160 206 IPR006652 GO:0005515
Arst7g03186 358 Pfam Kelch motif 115 156 IPR006652 GO:0005515
Arst7g03186 358 Gene3D - 9 354 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g03186 Arst-Chr7 77911205 77912721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g03186 4 217 EF-hand Containing Proteins AT4G39560 26.977 6.32e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g03186 - - gmx:100817910 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g03186 7 77911205 77912721 Arst7g03186 7 77911205 77912721 ECH
Arst7g03186 7 77911205 77912721 Arst9g00226 9 1873810 1875280 PCT