Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g03637 ATGTCTAAATTGAAATCTTCTTCATCATCTTCAATGTTACTTCCACTTCTTATATCTTTTCTTCTCCTCATTGTTCCAACATTCTCAACATCAAGAAAAGTTCTTGATGAGAATCACCATGAAGGGATCATCAGAGTCAACCTTCGCCATGTTGACTCCGGCAAGAACCTAACCAAGCTGGAGCGTGTCCAACATGGCATGAAGCGCGCCAAGAGCCGCCTCCAGTGGCTCAACGCAATGGTAACAAAAAAACAATCCCAATTCTCTAAAAGCGAAGAACTAGATTCAGATTCAGAATCTTCTGAATCTGAATCTAGTTCTTCGCAAATCCAGTCTCCAATACACGTGGGGAACGGGGAGTACCTAATGGAACTAGCCATAGGTACTCCTCCAAAGTCGTATCCCGCGATATTGGACACTGGTAGCGACCTCATATGGACACAATGCCAGCCTTGTTCCCAATGTTACAAGCAACCAACACCTATCTTCGACCCCAAGAAATCTTCGAGTTTCTCGAAGCTTTCTTGCGGAAGCAATCTATGCAACGTTCTACCTTCCTCCAGCTGTAGCAGCGGCGGTGGCGGCGACAGCGACGGCTGCCAGTATATGTACTCATACGGAGATTATTCCGTCACACAAGGCGTTTTAGCAACCGAGACTTTCACTTTTGGCAGTTCTAAGATTAAAAGCATTGGATTTGGATGCGGCGAAGATAATCAAGGAAGTGGATTCGAACAAGCTTCCGGTTTAGTCGGACTAGGCCGGGGGCCATTATCGCTTGTTTCGCAGCTCAAAGAGCCGAAATTTTCGTATTGCTTACAATCCATTGATGACAGAAAAAACAGTGTTCTTTTGTTAGGATCATTACCGAAAACGAAAAACGCGAAAGGAGCTGTAACGACACCGTTGCTTAAGAATCCGATGCAGCCTTCGTTTTACTTCCTTGATCTGCAAGGAATCTCGGTTGGTGGAACTCAATTGAGCATTGAGGAATCGACGTTTGAACTCGGCGATAACGGAAGTGGTGGCATGATCATTGATTCAGGGACAACAATTACATACATTGAAGAAAATGCTTTTGATGCATTGAAGAAGGAGTTTGTTTCACAAATGGATTTGCCAGTGGATAATTCTGGATCAACAGGGCTTGATGTATGCTTCAGTTTGGAGTCTGCTTCGGGTCGAATCGAGGTTCCGAAACTTGTTTTTCACTTCAGAGGNNNNNGGAATTACATGATTGGTGATGTGAATTTGGGTGTGGCATGTTTGGCTATGGGTAGTTCTTCTACTGGCATGTCAATATTTGGAAATGTTCAACAGCAGAATTTGTTGGTGAATCATGATCTTCAGAAGGAGACTATTACTTTTGTTCCTACACAGTGTGATCAGGTTTAA 1395 0.4366 MSKLKSSSSSSMLLPLLISFLLLIVPTFSTSRKVLDENHHEGIIRVNLRHVDSGKNLTKLERVQHGMKRAKSRLQWLNAMVTKKQSQFSKSEELDSDSESSESESSSSQIQSPIHVGNGEYLMELAIGTPPKSYPAILDTGSDLIWTQCQPCSQCYKQPTPIFDPKKSSSFSKLSCGSNLCNVLPSSSCSSGGGGDSDGCQYMYSYGDYSVTQGVLATETFTFGSSKIKSIGFGCGEDNQGSGFEQASGLVGLGRGPLSLVSQLKEPKFSYCLQSIDDRKNSVLLLGSLPKTKNAKGAVTTPLLKNPMQPSFYFLDLQGISVGGTQLSIEESTFELGDNGSGGMIIDSGTTITYIEENAFDALKKEFVSQMDLPVDNSGSTGLDVCFSLESASGRIEVPKLVFHFRGXXXNYMIGDVNLGVACLAMGSSSTGMSIFGNVQQQNLLVNHDLQKETITFVPTQCDQV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g03637 465 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 136 147 IPR001969 GO:0004190|GO:0006508
Arst8g03637 465 PRINTS Pepsin (A1) aspartic protease family signature 344 355 IPR001461 GO:0004190|GO:0006508
Arst8g03637 465 PRINTS Pepsin (A1) aspartic protease family signature 127 147 IPR001461 GO:0004190|GO:0006508
Arst8g03637 465 CDD pepsin_A_like_plant 120 462 IPR034161 -
Arst8g03637 465 FunFam Aspartyl protease family protein 294 464 - -
Arst8g03637 465 ProSiteProfiles Peptidase family A1 domain profile. 121 458 IPR033121 -
Arst8g03637 465 FunFam Probable aspartic protease At2g35615 100 287 - -
Arst8g03637 465 Pfam Xylanase inhibitor C-terminal 313 458 IPR032799 -
Arst8g03637 465 MobiDBLite consensus disorder prediction 88 112 - -
Arst8g03637 465 PANTHER OS07G0603500 PROTEIN-RELATED 77 462 - -
Arst8g03637 465 Gene3D Acid Proteases 94 287 IPR021109 -
Arst8g03637 465 Gene3D Acid Proteases 288 465 IPR021109 -
Arst8g03637 465 Pfam Xylanase inhibitor N-terminal 121 288 IPR032861 -
Arst8g03637 465 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 344 355 IPR001969 GO:0004190|GO:0006508
Arst8g03637 465 SUPERFAMILY Acid proteases 113 463 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g03637 Arst-Chr8 46782906 46784829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g03637 119 465 Miscellaneous Gene Families AT1G77480 25.916 3.63e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g03637 - - ahf:112707988 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g03637 8 46782906 46784829 Arst8g03637 8 46782906 46784829 ECH
Arst3g03948 3 111493882 111496868 Arst8g03637 8 46782906 46784829 ECH