Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02541 ATGCGCCATTCATATTTCTCCTACGTTAGAAATGTAACCCGATTCCGTTCACGTTCACGTTCTGCTGCATACTCTTCCTTCTTTTCGGAATTCGATGGAGATTCTACACTCGCAAGCCTCAAGCTTAAACAATCCCCTGCTTCAGATGATTCTTCTAATGTGGCGTTTAAGAAAATTTCTTCTATTTACTACGGTGATAGTATCTCGGTCAAGAAACCCATATCTAAGAGAAATGATAATGCAAAAGAGTCCCAAAGTCAGCCAGGGATATCATGGCTTTCAAACATATATAACAATAATTTATTATTACAACGGAAAGGACATTCTCGCAAAAAGAAACAGAAACACTTGTTTGAATTTTCTCAAGAGAACCGTTTTAATAAGTTGGTTAGAATTTGTGCAAAGGTACTTGGACCGGAGGCTACCATTGCATTGTTTGGTAAAGTTGGACGAGATCCAGGGATCAAAGGGTACAATGCACTGATAGAAATGTGCATAGAAAAGGCTAGGGAAAGTAGTGACGAAGACATAGTGATAGAAGAGTTGGGGAAGGTTTTCCATCTTTTTAAATTGATGGGTGAACGAGGATTTCGGCTAGAAGAGCAATCATATCGTCCACTTCTTTTGTATACTATTGACATGTGTATGGTTGAAGAGTTTCATTTTTTCTGTGATGCTATCAAAGACCAGAATGCCAGTTTAATTACCAGACTCGGTTACTACGAAATGATGTTGTGGTTAAGAGTTAATAATGAAGAAAAGATTCAAGAAATCTGTAATCTCATTGCAGAGAATGATGGTGAAGAAACTTCTGATTTACGAGAAAATTATTTCTTGGCTCTTTGTGAGAGTGAGCGGAAGAAGGAGATATTGGAGCTATTGGAAATCATAGACATAAAAAAGCTTTCATCTGTAGAATCTGTAGAAAAGATATTTCAGGCATTAGGAAGGCATCAACTGGAACCTGTTGCGGAGAACTTCCTTTTGGACTTCAAAACAAGTGATTATGAAACAAATAATATTACAAACTTCATTGCAAGTTATGCTGTTAGCATCCCAGATTTATTGGTTGAGAATGTCATTACAAAATTCAAGGATTTGCACCAAACACTTGAAGTGTCACCTTCATCCTCATCATATGAGAAGCTAATTTTACATTGCTGCACGTTGCGCGAGGTGCGTGTAGCTCTTGATATTGTTGGTGAAATGTGTGAAGGGGGCTTGACTTTATCAAATGAGATGTTACAGTCCATATTACAAACTTGTGAGGAAACATCCGAATATAATTTGGTTCATCGGATCTTCTCTACAATACGCCAGTACAATCTGGAGACAAATGATAAGACATTCAGATGTATGATAGACTTGTTCTTGAAGATGAAAGACCTTGAAGGTGCATATAGAATGCTCGATGAAATGGGGGAACTGAATTTGAAACCATCAGCTAGCATGTACAATACCATAATGGCAGAATGTTTTAGAGAGAAAAACACGAGTGATGGGGTCAGGGTCCTTGAGCACATGCAAAATGCTGATGTAATGCCTGATTCAGAGACTTTTAGCTACCTGATTAGCAACTCTGAAACTGAAGAGGATGTAGTCATGTATTATAAAGAACTGAAGGAATCTGGAATCAAACCTACAAAGCAAATTTTCATGGCCCTTATAAATGCTTATGCTGCTTGTGGACAGTTGGAGAAAGCAAAACAGGTAGTGTTAGATCCATTGATACCACAGAAGAACTTGAACCAAATCAAGTGTGTGCTTGTTTCAGTTCTTGCAGCACATGGGCAACTGTCTGAAGCTATTCATTATTACGAGGAAATCAAGAAAGCTGGACATAATTTGGAGCCAAAAGATATTATGAGTCTCATCGAGAAGGCTCGGTCCAATGTAGAGTTGGACAGGTTGCTTCTTCTACTTGAGGAATTAAATGATACAGATTATTGGAATGGAGCTTGCTGCAGAATCATCTTGTATTGTATTTGGAACAAGGATATAAGTTCTGCTGTCAACTTGTGTAAGCTCCTCAAGAATAAGTACCAAAGCAACGAACTGGTTACAGAAGCTCTCTGCGATAAGCACCACAGCGATGAATTGGTTATGAAAGTTCTCTTTGATAAGGTGTTCTCTCTCATCGACGGGTCAGAGTCGAGCCATTTGCAAGCGTGCCTCGAACTGCTTTCTGAAATCAAGGATAAGCTAGGCCTTGTGCCTCCAAAGGAATATCATGATTCTCTGCTAAGTGCTCATGCCAAAACCTCTGAATTACATAATGCTAACTGA 2286 0.3876 MRHSYFSYVRNVTRFRSRSRSAAYSSFFSEFDGDSTLASLKLKQSPASDDSSNVAFKKISSIYYGDSISVKKPISKRNDNAKESQSQPGISWLSNIYNNNLLLQRKGHSRKKKQKHLFEFSQENRFNKLVRICAKVLGPEATIALFGKVGRDPGIKGYNALIEMCIEKARESSDEDIVIEELGKVFHLFKLMGERGFRLEEQSYRPLLLYTIDMCMVEEFHFFCDAIKDQNASLITRLGYYEMMLWLRVNNEEKIQEICNLIAENDGEETSDLRENYFLALCESERKKEILELLEIIDIKKLSSVESVEKIFQALGRHQLEPVAENFLLDFKTSDYETNNITNFIASYAVSIPDLLVENVITKFKDLHQTLEVSPSSSSYEKLILHCCTLREVRVALDIVGEMCEGGLTLSNEMLQSILQTCEETSEYNLVHRIFSTIRQYNLETNDKTFRCMIDLFLKMKDLEGAYRMLDEMGELNLKPSASMYNTIMAECFREKNTSDGVRVLEHMQNADVMPDSETFSYLISNSETEEDVVMYYKELKESGIKPTKQIFMALINAYAACGQLEKAKQVVLDPLIPQKNLNQIKCVLVSVLAAHGQLSEAIHYYEEIKKAGHNLEPKDIMSLIEKARSNVELDRLLLLLEELNDTDYWNGACCRIILYCIWNKDISSAVNLCKLLKNKYQSNELVTEALCDKHHSDELVMKVLFDKVFSLIDGSESSHLQACLELLSEIKDKLGLVPPKEYHDSLLSAHAKTSELHNAN 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02541 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 515 IPR002885 -
Arst8g02541 761 PANTHER OS02G0132600 PROTEIN 13 761 - -
Arst8g02541 761 NCBIfam pentatricopeptide repeat 449 481 IPR002885 -
Arst8g02541 761 NCBIfam pentatricopeptide repeat 484 516 IPR002885 -
Arst8g02541 761 Coils Coil 627 647 - -
Arst8g02541 761 Gene3D Tetratricopeptide repeat domain 533 705 IPR011990 GO:0005515
Arst8g02541 761 Gene3D Tetratricopeptide repeat domain 408 532 IPR011990 GO:0005515
Arst8g02541 761 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 446 480 IPR002885 -
Arst8g02541 761 Pfam PPR repeat 552 571 IPR002885 -
Arst8g02541 761 Pfam PPR repeat 588 613 IPR002885 -
Arst8g02541 761 Pfam Pentacotripeptide-repeat region of PRORP 378 527 IPR033443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02541 Arst-Chr8 34737760 34746269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02541 374 644 Glycosyltransferase AT1G05670 20.285 2.05e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02541 - - ahf:112773224 1419.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02541 8 34737760 34746269 Arst8g02541 8 34737760 34746269 ECH
Arst8g02541 8 34737760 34746269 Arst3g02117 3 25871606 25884479 PCT