Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02117 ATGTTGCTGTGGATAAGAGTTGAAGATGAAGAAATGATTCGGGATATTTGTGAATATATTACCGTAGAAGATGGCCAAGACACTGCTGCTATGCGAGAAAATTACTTATTGGCTCTTTGTGAAAGTGATCTGAAGATCCAGATTACAGATGTGTTGAAAAATATAGACATAACAATGCTTTCATCTGCAAAATCTATAGCAAGTGTATTTCAATCATTAGGAAGGCTACAGTTGGAATCTCTTGCCGAGAATTTATTTTTGGATTTGAGAGCACAAGATTTTGATGAAGATGATATTTCAGGCTTCATTGCTGATTATGCTGTTAGCATTCCAAATTTAGCGGTTGAAGATATCATCTCAAAATTCAAGAGTTTGCATGATCTATTGGAAGTTTTACATTCATCGTCATCATATGAAAAGCTGATTATGTATTGCTGTGATTTAGGCAAGGTTGATGTTGCACTTGATCTTGTTGATAATATGTGTGAAGCAGGCTTTACATTGTCAACTAGGATGTTACAGTCCATATTACACATTTGTGAGGAAACCTATGAACATATTTTGGTTTACCGGATCTATTCCATCATACAGCGGTTCCATTTGAAGTTGAATGGTGAAATATGTAGGTGTTTGGTAAATTTTTGCGTGAGGGTGAAAGATTTTAAAGGTGCATACAAGATGGTTGATGACTTGGAGAAAATGAATTTCAAACCTACTACCGCCATGTACAATGCTATAATGGCAGGATATTTTCGAGAGAAAAATATCAGTGGTGCTCTGAGGGTCCTCAAGCACATGCAGGATGCCAATCTTAATCCTGATGTACAGACTTTCAGCTATTTGATTAGTAATTGTGAAACAGAAGAGGATATAATCAAGTATCGTGAAGAAATGGAGCAATATAAAATCCCACTTGCAAAACCGATTTTTATGGCCCTTATTAATTCATATGCAGCTTGTGGCAAATTGGATATGGCAAAACAGGTCATTTTGGATCCGAACATACCAGCAAAAAGCTTAAATGAAATCAAGAGCGTCCTTGTCTCAGCTCTTGCATCACATGGGCAGTTGTCCGAGGCACTCTTAGTATATGAGGAGATTAATAAAGCTGGATACAATTTGGAACCAAAAGCTGTTATAAGTCTTATCGAAGAGTTCACCAAATTCAAAGGAGAGTTGGATGGGATGCTTATGCTACTTACAGAATTGAGTGATCTAGACTATTGGGTCGACGGCTGCTTCAGAGTTATCATATATTGTATTCACAACAAGCATCTAAGTTCTGCTATTGACTTGTTCAAGAAACTCAAGGATAAGTTTGAAAGTGATGAACTAGTATTGGAAGTTCTCTTTGATGAAGTGTTTGCTGCAATTGCAACATCCGAGTCCTCAAATTTGCAGATTGGTTTAGACTTGCTTTGGGCAGTCAAGAACGAGCTTGGTCTCGTGCCTTCACGGCAATGTCTTGATTTTCTTCTAAGTGCCTGCACCAATGCTGGAGATTTGAGTAATGCTCGTTTGATTTGGAGAGAATATGAGGTTGCTGGATTTCCATACAACGTGCTAAGTTATTTGAGGATGTATCAAGCACTTTTGGCATCGGGAGATTATAGATCTGCTAACTTTATGCTAAGTAAAATTCCGAAAGATGACAGCGAGGTATCTGCTATCATCAAAGCCTGTCAAGAAACATACTCTGGTCTTTCCTCTGTGGCAAAGATGAAAACGAAAGTAACAAAAAAGAAAGAAAAACGAGAGGCTTGA 1764 0.377 MLLWIRVEDEEMIRDICEYITVEDGQDTAAMRENYLLALCESDLKIQITDVLKNIDITMLSSAKSIASVFQSLGRLQLESLAENLFLDLRAQDFDEDDISGFIADYAVSIPNLAVEDIISKFKSLHDLLEVLHSSSSYEKLIMYCCDLGKVDVALDLVDNMCEAGFTLSTRMLQSILHICEETYEHILVYRIYSIIQRFHLKLNGEICRCLVNFCVRVKDFKGAYKMVDDLEKMNFKPTTAMYNAIMAGYFREKNISGALRVLKHMQDANLNPDVQTFSYLISNCETEEDIIKYREEMEQYKIPLAKPIFMALINSYAACGKLDMAKQVILDPNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCIHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLRMYQALLASGDYRSANFMLSKIPKDDSEVSAIIKACQETYSGLSSVAKMKTKVTKKKEKREA 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02117 587 NCBIfam pentatricopeptide repeat 137 169 IPR002885 -
Arst3g02117 587 NCBIfam pentatricopeptide repeat 242 275 IPR002885 -
Arst3g02117 587 Pfam Pentacotripeptide-repeat region of PRORP 136 281 IPR033443 -
Arst3g02117 587 PANTHER OS02G0132600 PROTEIN 1 581 - -
Arst3g02117 587 Gene3D Tetratricopeptide repeat domain 233 411 IPR011990 GO:0005515
Arst3g02117 587 Gene3D Tetratricopeptide repeat domain 68 232 IPR011990 GO:0005515
Arst3g02117 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 134 168 IPR002885 -
Arst3g02117 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 239 273 IPR002885 -
Arst3g02117 587 Gene3D Tetratricopeptide repeat domain 414 587 IPR011990 GO:0005515
Arst3g02117 587 Pfam PPR repeat 310 330 IPR002885 -
Arst3g02117 587 Pfam PPR repeat 346 371 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02117 Arst-Chr3 25871606 25884479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02117 131 550 Glycosyltransferase AT1G05670 20.248 3.59e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02117 - - adu:107477993 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02541 8 34737760 34746269 Arst3g02117 3 25871606 25884479 PCT