LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g02407	ATGGCGGCTGCGACGTCGTTTTCTGCCACAATCACCGCAAACTCCGAAACCCTAGCTGGGCCTGTTTCAGGAAGAACCCTCGCCGTTGCAAACGCCAACGCTAATGGAAACGTCTCATTCCGACAATCCTTGTCGTCATCATCCTCGAAGCTGAGCTTCGGAGCACTGAAGTGTAGCCGACGGAACTCCACCGGAGCTCTTGGAGCTTGCATGGTGTCGGCGCCGGCTGTGAAGGCTCCCGTCTCGCTCGATTTCAACACCTCCGTCTTCAAGAAGGAGAAGATCAGCCTCGCGGGACACGACGAGTATATCGTGAAAGGAGGTAGGGATTTGTTCCATTTGTTGCCAGATGCTTTCAAAGGGATTAAGCAGATTGGTGTTATCGGTTGGGGATCGCAGGGACCTGCTCAGGCTCAGAATCTCAGGGACTCGCTTGCTGAAGCTAAGTCTGATATTGTGGTCAAGATTGGGCTCAGGAAAGGTTCTCGGTCATTTGCTGAAGCTCGAGCGGCTGGTTTTTCTGAGGAGAATGGGACTCTAGGTGACATATGGGAAACTGTCTCCGGCAGCGATCTTGTGTTGCTGTTAATTTCTGATGCTGCACAGGCAGATAACTATGAAAAAATTTTCTCCCATATGAAATCAAACAGCATACTTGGGCTGTCCCATGGGTTTCTTCTTGGGCATTTGCAGTCGTTGGGACTTGATTTTCCAAAGAACATTAGTGTAATTGCTGTGTGCCCAAAGGGAATGGGTCCATCAGTAAGGAGACTCTATGTACAAGGAAAAGATATAAATGGTGCTGGAATTAATTCAAGTTTCGCAGTTCACCAGGATGTGGATGGTAGAGCTACTGATGTTGCTCTGGGATGGTCAGTTGCCCTTGGTTCCCCATTCACTTTTGCCACTACACTGGAGCAGGAATACAAGAGTGATATCTTTGGGGAGAGAGGAATTTTACTTGGTGCTGTTCATGGAGTTGTGGAAGCCTTGTTTAGAAAATACACTGAAAATGGAGTCCCCGAAGACCTAGCCTATAAGAACACTGTTGAGAGCATAACAGGAATTATATCTAAAACCATATCATCTAAGGGCATGCGGGAGGTATACTATGCTTTAGATGATACTGGGAAAAGCATATTTGAAAAGGCATATAGTGCTGCTTATTACCCGTGCATGGAGATTTTGTATGAATGCTATGAGGATGTAGCCAGTGGTAGTGAGATTCGCAGTGTTGTTCTGGCTGGCCGACGTTTTTATGAGAAAGAGGGTCTACCTGCTTTCCCCATGGGTAAAATTGACCAGACCCGCATGTGGAAGGTTGGCGAGCGTGTCCGATCTACAAGACCAGCGGGTGATCTAGGCCCATTAGATCCATTTACCGCTGGTGTCTTTGTGGCATTGATGATGGCTCAGATTGAAATCCTGAGGAAGAAAGGACATTCCTACTCCGAAATCATCAATGAGAGTCTCATTGAGGCTGTTGATTCATTGAATCCTTTCATGCATGCTCGAGGTGTTTCCTTCATGGTTGATAACTGTTCAACCACAGCACGGTTGGGTTCGAGGAAATGGGCTCCCCGATTTGATTACATCCTAACCCAGCAGGCCTTGGTGGCAGTGGAAGAATGTGTGCCTGTCAACCGGGACCTAATCAGCAACTTCCTGTCAGACCCAGTGCATGGAGCCATTAAAGTCTGTGCCCAGCTGAGACCTACCGTTGACATCTCCGTGCCACCGGATGCAGACTTTGTTCGTCCTGAGTTGCGCCAGTCCAACTAG	1782	0.4826	MAAATSFSATITANSETLAGPVSGRTLAVANANANGNVSFRQSLSSSSSKLSFGALKCSRRNSTGALGACMVSAPAVKAPVSLDFNTSVFKKEKISLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSRSFAEARAAGFSEENGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKSNSILGLSHGFLLGHLQSLGLDFPKNISVIAVCPKGMGPSVRRLYVQGKDINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGVVEALFRKYTENGVPEDLAYKNTVESITGIISKTISSKGMREVYYALDDTGKSIFEKAYSAAYYPCMEILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLDPFTAGVFVALMMAQIEILRKKGHSYSEIINESLIEAVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVEECVPVNRDLISNFLSDPVHGAIKVCAQLRPTVDISVPPDADFVRPELRQSN	593

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g02407	593	Gene3D	-	71	298	-	-
	Arst8g02407	593	ProSiteProfiles	KARI C-terminal domain profile.	453	589	IPR000506	GO:0004455\|GO:0009082
	Arst8g02407	593	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	82	301	IPR036291	-
	Arst8g02407	593	PANTHER	KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL	82	482	IPR013023	GO:0009082\|GO:0016491
	Arst8g02407	593	Pfam	Acetohydroxy acid isomeroreductase, catalytic domain	463	534	IPR000506	GO:0004455\|GO:0009082
	Arst8g02407	593	Pfam	Acetohydroxy acid isomeroreductase, catalytic domain	306	450	IPR000506	GO:0004455\|GO:0009082
	Arst8g02407	593	Gene3D	-	299	572	IPR013328	GO:0016491
	Arst8g02407	593	ProSiteProfiles	KARI N-terminal domain profile.	105	303	IPR013116	-
	Arst8g02407	593	Pfam	Acetohydroxy acid isomeroreductase, NADPH-binding domain	123	297	IPR013116	-
	Arst8g02407	593	ProSiteProfiles	KARI C-terminal domain profile.	304	452	IPR000506	GO:0004455\|GO:0009082
	Arst8g02407	593	FunFam	Ketol-acid reductoisomerase	71	298	-	-
	Arst8g02407	593	FunFam	Ketol-acid reductoisomerase	299	572	-	-
	Arst8g02407	593	SUPERFAMILY	6-phosphogluconate dehydrogenase C-terminal domain-like	306	591	IPR008927	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g02407	Arst-Chr8	33380215	33384341	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g02407	K00053		-	gmx:100799921	961.059

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst8g02407	8	33380215	33384341	Arst8g02407	8	33380215	33384341	ECH
	Arst8g02407	8	33380215	33384341	Arst3g01993	3	24034029	24038073	PCT