LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g01993	ATGGCTGCTGCTGCCGCTTCTTCAAACACCATAGCACTAGCAGCAGCTAAGCCCTTAACCAAAGCCCCTACTCCAACCGTTTTCAACGGTCTCGCATTCTCCGTTAACAACCTCACTCCAAGACCCCTCGCTGCTCGCCACGTCAACGGTGCTGCCCTCGCTGCTAAAATGGTTTCGTCGGCGCCGGCGGTTTCTCTCCCTGCCTCGCTTGATTTCAACACTTCTATCTTCAAGAAGGAGAAGATTAGCCTCGCTGGACACGATGAGTACATTGTGAAAGGAGGGAGAGATTTGTTTCATTTGTTGCCGGATGCTTTCAAGGGGATTAAGCAGATTGGTGTTATCGGATGGGGTTCACAGGGACCTGCACAGGCCCAGAATCTTCGGGACTCGCTCGCTGAAGCAAAGTCTGACATAGTGGTTAAGATTGGACTCAGGAAAGGTTCTAGTTCCTTTAATGAAGCTCGGGCAGCTGGTTTCAGTGAGGAAAATGGAACTCTAGGTGACATATGGGATACTATCTCAGGCAGTGATCTTGTCTTGCTCTTAATTTCAGATGCTGCACAGGCAGATAGTTATGAAAAAATATTTTCGCACATGAAGCCAGGCAGCATACTTGGATTGTCCCATGGGTTTCTTCTTGGGCATTTACAGTCACTGGGAATTGATTTTCCCAAGCACTTCAGTGTAATTGCTGTATGTCCAAAGGGGATGGGTCCTTCAGTGAGGAGGCTCTATGTTCAAGGCAAAGAGATAACATGGTCTGTTGCCCTTGGTTCTCCCTTCACATTTGCGACTACATTGGAGATGGAATACAGGAGTGACATATTTGGAGAGAGAGGCATTTTACTCGGTGCTGTTCATGGAATTGTGGAGTCCTTGTTTAGGAGGTACACTGAAAATGGAATGAGTGAAGATCTGGCTTATAAGAACACTGTTGAGTCCATAACAGGAATCATATCTAAAATCATATCAACTAAGGGCATGTTGGCTGTATACAATTCTTTATCTGAAGATGAAAAAAGAGAATTCGAGACGGCATATAGTGCTTCATATTATCCCTGCATGGAGATTTTGTACGAGTGCTACGAGGATGTAGCTAGTTGTAGCGAGATTCGCAGTGTTGTTTTGGCTGGGCGTCGCTTTTATGAGAAAGAGGGTCTACCTGCCTTTCCCATGGGCAAAATTGATCAGACCCGCATGTGGAAAGTTGGTCAGCGTGTCCGATCTACAAGGCCAGCAGGTGATCTAGGGCCATTATATCCATTTACTGCTGGTGTATATGTGGCATTGATGATGGCTCAGATTGAGATCTTGAGGAAGAAAGGGCATTCCTACTCTGAAATCATCAATGAGAGTGTCATTGAGTCTGTTGATTCATTGAACCCTTTCATGCATGCTCGTGGTGTATCTTTCATGGTTGATAACTGTTCAACCACAGCAAGGTTGGGTTCAAGGAAATGGGCTCCTAGATTCGATTACATCCTAACCCAGCAGGCCTTGGTGGCAGTAGACAGTGGTGCGCCTACTAACCGGGACCTGATCAGCAACTTCTTGTCAGATCCAGTCCATGGAGCCATTGAAGTATGTGCTGAACTGAGGCCTACCGTGGATATTTCAGTCCCACCAGATGCGGATTTTGTCCGTCCTGAGTTGCGCCAGTCTGGAAACTAG	1674	0.4671	MAAAAASSNTIALAAAKPLTKAPTPTVFNGLAFSVNNLTPRPLAARHVNGAALAAKMVSSAPAVSLPASLDFNTSIFKKEKISLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEARAAGFSEENGTLGDIWDTISGSDLVLLLISDAAQADSYEKIFSHMKPGSILGLSHGFLLGHLQSLGIDFPKHFSVIAVCPKGMGPSVRRLYVQGKEITWSVALGSPFTFATTLEMEYRSDIFGERGILLGAVHGIVESLFRRYTENGMSEDLAYKNTVESITGIISKIISTKGMLAVYNSLSEDEKREFETAYSASYYPCMEILYECYEDVASCSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGQRVRSTRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDSGAPTNRDLISNFLSDPVHGAIEVCAELRPTVDISVPPDADFVRPELRQSGN	557

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g01993	557	Pfam	Acetohydroxy acid isomeroreductase, catalytic domain	269	413	IPR000506	GO:0004455\|GO:0009082
	Arst3g01993	557	Pfam	Acetohydroxy acid isomeroreductase, catalytic domain	426	494	IPR000506	GO:0004455\|GO:0009082
	Arst3g01993	557	SUPERFAMILY	6-phosphogluconate dehydrogenase C-terminal domain-like	269	554	IPR008927	-
	Arst3g01993	557	FunFam	Ketol-acid reductoisomerase	57	269	-	-
	Arst3g01993	557	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	70	257	IPR036291	-
	Arst3g01993	557	Pfam	Acetohydroxy acid isomeroreductase, NADPH-binding domain	110	257	IPR013116	-
	Arst3g01993	557	Gene3D	-	265	535	IPR013328	GO:0016491
	Arst3g01993	557	FunFam	Ketol-acid reductoisomerase	262	535	-	-
	Arst3g01993	557	ProSiteProfiles	KARI C-terminal domain profile.	267	415	IPR000506	GO:0004455\|GO:0009082
	Arst3g01993	557	Gene3D	-	57	264	-	-
	Arst3g01993	557	PANTHER	KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL	69	445	IPR013023	GO:0009082\|GO:0016491
	Arst3g01993	557	ProSiteProfiles	KARI C-terminal domain profile.	416	552	IPR000506	GO:0004455\|GO:0009082
	Arst3g01993	557	ProSiteProfiles	KARI N-terminal domain profile.	92	293	IPR013116	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g01993	Arst-Chr3	24034029	24038073	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g01993	K00053		-	gmx:100789879	897.501

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst3g01993	3	24034029	24038073	Arst3g01993	3	24034029	24038073	ECH
	Arst8g02407	8	33380215	33384341	Arst3g01993	3	24034029	24038073	PCT