Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02228 ATGGCAGCTCTCACTTCTTTGTCCTTCTCATCATCATTCACTCAGTGCTGTGAGAGAAAAGCAACTGTGTCTTCTTCAACTCATCGTTTCTTTGTCTCTTCAAGTTCTGAAGTCTTCGGTTTTAGGACCATTTTCTCGTACCATTATGGGGGTGTTCGAGCTTCTAGTTCCTCATCCAAAATGGTTGTCCAATGCATGTCTTCTGCCACAGATGCTCCTACTGTTTCTGAGACAAAGTTAAATTTCCTTAAGGCATATAAGCGACCAATCCCAAGTATCTACAACACTGTTCTGCAGGAGCTTATTGTGCAGCAACATTTGATGAGATATAAGAGATCGTATCGCTATGACCCTGTGTTTGCTCTTGGTTTTGTCACTGTTTATGATCAACTCATGGAAGGGTATCCTAGTGATGAGGACCGAGATGCTATCTTCAAAGCATATATTAATGCTTTGAATGAAGATCCTGAACAATACAGAAAAGATGCTCAAAAGTTGGAAGAGTGGGCGAGGGCTCAAAACCTAACTTCCCTTGTTGAGTTTTCATCCAAAGATGGAGAAATTGAGGGGATCTTGAAGGACATAGCAGAAAGAGCAGGAAAGGGGGATTTCAGCTACAGTCGTTTCTTCGCAGTAGGACTATTTCGTCTTCTTGAGTTAACAAATGCAACAGAGCCAACAATTTTGGAAAAGCTCTGCGCAGCTTTAAACATCAACAAAAAAAGTGTTGATCGGGACTTGGATGTGTATCGGAATCTGCTTTCCAAGTTGGTTCAAGCAAAGGAGCTGCTAAAGGAATACGTTGACAGGGAGAAGAAGAAAAGAGAAGAGAGAGCTGAACCCCAAAAGGCTAATGAGACCATTACAAAGTGTCAGGGACAACAACTGTCTGGTCAGCAGCTATGGTCTTATGAAAATGACATCTACTGA 930 0.4194 MAALTSLSFSSSFTQCCERKATVSSSTHRFFVSSSSEVFGFRTIFSYHYGGVRASSSSSKMVVQCMSSATDAPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFKAYINALNEDPEQYRKDAQKLEEWARAQNLTSLVEFSSKDGEIEGILKDIAERAGKGDFSYSRFFAVGLFRLLELTNATEPTILEKLCAALNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKANETITKCQGQQLSGQQLWSYENDIY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02228 309 Hamap Protein Thf1 [thf1]. 69 276 IPR017499 GO:0010207|GO:0015979
Arst8g02228 309 Pfam Thylakoid formation protein 74 278 IPR017499 GO:0010207|GO:0015979
Arst8g02228 309 NCBIfam photosystem II biogenesis protein Psp29 71 275 IPR017499 GO:0010207|GO:0015979
Arst8g02228 309 Coils Coil 250 280 - -
Arst8g02228 309 MobiDBLite consensus disorder prediction 271 290 - -
Arst8g02228 309 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 296 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02228 Arst-Chr8 31335257 31337824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02228 - - gmx:100814341 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02228 8 31335257 31337824 Arst8g02228 8 31335257 31337824 ECH
Arst8g02228 8 31335257 31337824 Arst3g01727 3 20011935 20015660 PCT