Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01727 ATGGCCGCTGTTACTTCTTCTTTCTCTCTCTCTACTCTTTCACAGTGCTCGCAGAGGAAGAACCTTTCCTTCTCTTCTTCTACTCGTTTTTTGGGAACCAATTCCGATTCTTTCCGATTGGGACCGAATTTCTCGCTACTATATGTTGCCGTTCGAGCTTCCGATTCCGCTTCCAGAGTGGTTGTTCGGTGTTCCTCTTCCCTCTCAGATATTCCAACTGTTTCGGAGACAAAGTTAGGTTTCCTTAAAGCCTATAAACGACCAATCCCTAGTATCTACAACAGTGTGTTGCAGGAGCTGATTGTCCAGCATCATTTGATGAGATACAAGAGATCATACCAGTATGACCCTGTATTTGCTCTTGGCTTTGTCACTGTATATGATCAACTCATGGAAGGGTATCCTAGTGATGAGGATCGGGATGCTATCTTCCAGGCATACATTAATGCATTGAAGGAAGATCCAGAACAATACAGAGCAGATGCACAGAAGTTGGAAGAATGGGCACGGGCTCAAAACTCAACCTCCCTGATTGAGTTTTCATCCAGAGAAGGAGAAGTTGAGGGAATATTAAAGGATATTGCAGAAAGAGCTGGTGCAAAGGGGAATTTTAGCTATAGTCGCTTCTTTGCAATTGGCCTCTTTCGCCTTCTTGAATTGGCAAATGCAATGGAACCAACAATTTTGGAAAAGCTTTGTGCAGCTTTAAATGTTGACAAAAGAAGTGTTGATCGGGACTTGGATGTGTATCGCAATCTACTTTCTAAGTTGGTTCAAGCTAAAGAGCTGCTAAGGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGTCTGAACCACAAAAGGCAAATGAGGCCATCACAAAATGTTTGGGACAACAGCAAATTTCTGCCCT 899 0.4294 MAAVTSSFSLSTLSQCSQRKNLSFSSSTRFLGTNSDSFRLGPNFSLLYVAVRASDSASRVVVRCSSSLSDIPTVSETKLGFLKAYKRPIPSIYNSVLQELIVQHHLMRYKRSYQYDPVFALGFVTVYDQLMEGYPSDEDRDAIFQAYINALKEDPEQYRADAQKLEEWARAQNSTSLIEFSSREGEVEGILKDIAERAGAKGNFSYSRFFAIGLFRLLELANAMEPTILEKLCAALNVDKRSVDRDLDVYRNLLSKLVQAKELLREYVDREKKKREERSEPQKANEAITKCLGQQQISALK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01727 301 Pfam Thylakoid formation protein 73 278 IPR017499 GO:0010207|GO:0015979
Arst3g01727 301 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 296 IPR017499 GO:0010207|GO:0015979
Arst3g01727 301 NCBIfam photosystem II biogenesis protein Psp29 70 275 IPR017499 GO:0010207|GO:0015979
Arst3g01727 301 Coils Coil 250 280 - -
Arst3g01727 301 Hamap Protein Thf1 [thf1]. 68 276 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01727 Arst-Chr3 20011935 20015660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01727 - - aip:107632658 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01727 3 20011935 20015660 Arst3g01727 3 20011935 20015660 ECH
Arst8g02228 8 31335257 31337824 Arst3g01727 3 20011935 20015660 PCT