Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01996 ATGCAATTAAAGGATAAGTGTGGTGAAAAATTCAGCTCTTTTTTAGCCGACAAAGTGGTGGCAGTTGCAGGTGATGTTTCTCTTCACAATTTCGGAATCAAAGACCAAATCCTCATTGAAGAGATGTTGGATGCGATTGATATTATAGTGCATACTGCCGGAACTACTACACTTGATGAAAGATTTGATGTTGCAATGGATATAAATACAATGGGAGCTTTTAACGCTATAAACTTTGCTAAAATGTCTTATGTTTGTGGAGGAGCAAATGGATTAATATCTGAGGAACCATTTCGCCTGGGCCAAACACTTAAAAGCTCATCAGAATTGGACATCAACTTAGAAAAGCAGTTGATTGAGGAAAAACTTAGTGAACTCCAAGCACAAAATGCCAATGAAGAAACAATCACCTCAATAATGAAAGAATTTGGAGCAATAAGGGCAAATATGTATGGATGGCCAAACACGCATACATTTACAAAAGCCATGGGAGAAATGCTTGTGATGAACATGAAGCGAAATATACCATTGATCATCTCACGTCCTACTGCTGTCATCGGCACTCATTCAGAACCTTTTCCGGGTTGGATTGAAGGTGTTAGAACTATAGACTTTGTGTTCGTTGAGTATTTCAAAGGAGCAATAACTAGTTTTGTTGGTGATCCAAATAAAACTATGGACATGGTACCAGCAGACATGGTGATAAACTCAATGATCATAGCGCTGTTGGTTCATTCTAAGTGTAATCTTTCCAACAATTTCATCTGCTACCATATTGGTACTTCCCTAAGAAATCCAATTAAATTGTGGGATATTCAAGAAATAATGTATCTTTATATTACAAGCAATCCCTGGCTAAGAAATTATGAAAAGTCAGGGGCTTTATGTGAAAAACTATTATTCAACCCAAGAATTACTGAAGATCATGAATTTCACCAAACCAAGGCTTTGAAGAGGATAATGAATCTTTATAGGCCTTATGGTCTCGAGGGCATGTACGTACCCTATGCTACATATTCAATAAGTTTTGATGATGAGAACACAGAGAAGTTGCGAATAGCAATAAAAGGAGTTGGCAATATGGATAAGGAATATATAACTTTGATCCTAAGAGCATTGATTGGAAGGACTACTTGA 1137 0.3685 MQLKDKCGEKFSSFLADKVVAVAGDVSLHNFGIKDQILIEEMLDAIDIIVHTAGTTTLDERFDVAMDINTMGAFNAINFAKMSYVCGGANGLISEEPFRLGQTLKSSSELDINLEKQLIEEKLSELQAQNANEETITSIMKEFGAIRANMYGWPNTHTFTKAMGEMLVMNMKRNIPLIISRPTAVIGTHSEPFPGWIEGVRTIDFVFVEYFKGAITSFVGDPNKTMDMVPADMVINSMIIALLVHSKCNLSNNFICYHIGTSLRNPIKLWDIQEIMYLYITSNPWLRNYEKSGALCEKLLFNPRITEDHEFHQTKALKRIMNLYRPYGLEGMYVPYATYSISFDDENTEKLRIAIKGVGNMDKEYITLILRALIGRTT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01996 378 Gene3D - 2 310 - -
Arst8g01996 378 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 354 IPR026055 GO:0080019
Arst8g01996 378 Coils Coil 116 136 - -
Arst8g01996 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 246 IPR036291 -
Arst8g01996 378 Pfam Male sterility protein 9 238 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01996 Arst-Chr8 28538699 28541748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01996 3 286 Acyl Lipid Metabolism Gene Families AT5G22500 42.761 2.69e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01996 K13356 - adu:127744221 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01996 8 28538699 28541748 Arst8g01996 8 28538699 28541748 ECH
Arst8g01996 8 28538699 28541748 Arst3g00049 3 348001 351085 PCT