Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00049 ATGGAGTTGGGAAGCATACTCCACTTCCTTGAGGATAAGACCATTCTCATCACTGGAGCCACTGGCTTCCTTGCCAAAATTCTGGTGGAGAAGATACTCAGGGTTCAACCAAATGTTAAGAAACTATTTCTTCTTTTAAGAGCTGCCGATGCTAAGTCTGCTACTCATCGCTTGCAAAATGAGATCATAGGCAAGGACTTGTTTAGATTGCTAAAAGAAAACTTAGGTCCAAACTTCAATTCCTTCATAGCACAAAAGTTGACACTCGTTCCAGGAGATATTTCTCGCCCGAATTTGGGTTTGGACTCTCATTCTATTCTCAAGCAACAAATTTACGACCAAACACATGTTATTATTAATTTAGCTGCAACTACCAACTTTGATGAAAGGTATGATATATCGTTGGGCCTAAATACCTTTGGGGTTAAGCACGTCATAAACTTTTCCAAAAAATGCACTAAACTCAAGGTGCTTGTACATGTATCAACAGCTTATGTGTGTGGTGAGGGAGAAGGTCTAATAATGGAGAAGCCATATGAGATGGGTGTTTCACTAAATGGAGTTGTTGGATTAGACATCGATGCCGAACACAAACTCATACGTCACAACTTAACTCACCTTCAACACCTGGGAGCCACAGAGAACGAAATTAAAGTTGCCATGAAGGACTTGGGTATTACCAGGGCAAAGAATTATGGATGGCCAAACACATATGTAATGACAAAAGCAATGGGAGAGATGATAGTAGAGGAGGAGAAAGGCAAAGGAGAGTTGGGTGTTGATATTGTCATTGTTCGTCCTTCCATAGTTACCAGCACCTTCAAGGACCCATTCCCCGGTTGGGCCGAGGGTGTTAGAACCATTGACAGTCTTGCTGTTGCTTATGGTAAAGGAAAACTCACTTGCTTCCTTGGAGATCTCAACGCCATTGTTGATGTCATACCAGCAGACATGGTGGTCAATGCAATACTAGTGGCCACGGCAGCTCATGCAACTCATCGTGCTAATGGTAATGGCATATATCATGTTACTTCCTCTGTTCGAAACCCACTTCGAAACTGGAATCTGCAAGACGTGGGGTACAGGTATTTCACGGCCAAACCATGGATCAACAAGGATGGTAAGGCAGTGAAGGTTGGGAAATGCAAAGTGCTGAGTAACATGGACAGCTTCAACAGACACATGTTCCTCCGCTACTTGCTTCTCTTAAAGGGACTGCAGCTGGCCAACACTGCCTTTTGCCACTTCTTCCAGGGAACCTATCTTGATCTCAACAGGAAGATTCAGATCGTCATGCGCTTGGTTGACCTTTACAAGCCTTACTTGTTCTTCAAGGGAGTTTTTGATGATATCAACACACACATGTTGAGACAAGCTGTGCTCATGGACACTCATCTCTTTTACTTCGATCCCAACCTCATCAATTGGGATGATTACTTCCTCAACACTCATCTCCCTGGTGTCGTCAAATACATCTTCAATAACAATTATTAA 1494 0.429 MELGSILHFLEDKTILITGATGFLAKILVEKILRVQPNVKKLFLLLRAADAKSATHRLQNEIIGKDLFRLLKENLGPNFNSFIAQKLTLVPGDISRPNLGLDSHSILKQQIYDQTHVIINLAATTNFDERYDISLGLNTFGVKHVINFSKKCTKLKVLVHVSTAYVCGEGEGLIMEKPYEMGVSLNGVVGLDIDAEHKLIRHNLTHLQHLGATENEIKVAMKDLGITRAKNYGWPNTYVMTKAMGEMIVEEEKGKGELGVDIVIVRPSIVTSTFKDPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLNAIVDVIPADMVVNAILVATAAHATHRANGNGIYHVTSSVRNPLRNWNLQDVGYRYFTAKPWINKDGKAVKVGKCKVLSNMDSFNRHMFLRYLLLLKGLQLANTAFCHFFQGTYLDLNRKIQIVMRLVDLYKPYLFFKGVFDDINTHMLRQAVLMDTHLFYFDPNLINWDDYFLNTHLPGVVKYIFNNNY 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00049 497 Gene3D - 8 399 - -
Arst3g00049 497 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 346 IPR036291 -
Arst3g00049 497 Pfam Male sterility protein 17 323 IPR013120 -
Arst3g00049 497 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 494 IPR026055 GO:0080019
Arst3g00049 497 Pfam Male sterility protein 400 494 IPR033640 -
Arst3g00049 497 CDD FAR_C 421 493 IPR033640 -
Arst3g00049 497 CDD FAR-N_SDR_e 13 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00049 Arst-Chr3 348001 351085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00049 114 493 Acyl Lipid Metabolism Gene Families AT4G33790 58.486 2.97e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00049 K13356 - gmx:100798338 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01996 8 28538699 28541748 Arst3g00049 3 348001 351085 PCT