Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01952 ATGGCTTCCTCGAGAGTGGATCTAGATGGGAACCCAATAAAGCCCATAACGATTTGCATGATCGGTGCCGGAGGTTTCATAGGCTCCCACCTCTGCGAGAAGCTCATGACGGAGACGCCGCACACGGTGCTCGCTTTGGACGTTTACAACGACAAGATCAAGCACCTCTTGGAGCCTGAAACCAATCCATGGCATGGTAGAATCAACTTCCACCGCCTCAACATCAAGCACGATTCGAGGCTCGAAGGTCTTATCAAAATGGCAGATCTGACGATTAATTTGGCTGCTATATGCACTCCTGCGGATTACAACACGCGCCCTCTGGACACCATTTATAGCAACTTCATCGATGCACTACCAGTGGTGAAGTACTGTTCTGAAAACAACAAGCGTCTCATTCATTTTTCGACCTGTGAAGTGTATGGGAAAACCATTGGGAGCTTTCTCCCTAAGGATAGCCCGCTTCGTAAGGATCCTGCATACTATGTACTTAAAGAAGATGAGTCTCCATGCATTTTTGGTTCCATTGAAAAACAGAGATGGTCTTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGTTTGGAGTTCACAATTGTGCGACCTTTTAATTGGATTGGACCACGAATGGATTTCATTCCCGGCATTGATGGTCCAAGTGAAGGTGTTCCTCGTGTTCTGGCATGCTTTAGCAATAATCTCCTGAGGAAAGAGCCCCTAAAGCTTGTGGATGGTGGTCAATCCCAAAGGACCTTTGTTTATATTAAGGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCTAGGGCTAATGGACACATCTTTAATGTTGGTAACCCAAACAATGAGGTTACAGTTAGGCAGCTTGGGGAAATGATGGTTAAGGTTTACTCTAAGGTAAGTGGAGATCCACCTTTGGAAAATGCTACAGTTGATGTGAGCTCTAAAGAATTTTATGGTGAGGGATACGATGATAGCGACAAGCGAATTCCAGACATGACCATCATTAACAGACAGCTTGGATGGAACCCAAAAACCTCACTTTGGGACTTGCTTGAATCCACACTGACCTATCAGCACAGGACCTATGCTGAAGCCATTAAGAAAGTGATTGCTAAACCTGTTGCAAGTTAA 1164 0.4493 MASSRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMTETPHTVLALDVYNDKIKHLLEPETNPWHGRINFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRKEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLGEMMVKVYSKVSGDPPLENATVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01952 387 Gene3D - 16 378 - -
Arst8g01952 387 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 17 372 - -
Arst8g01952 387 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 16 379 - -
Arst8g01952 387 Pfam NAD dependent epimerase/dehydratase family 18 288 IPR001509 -
Arst8g01952 387 CDD Arna_like_SDR_e 17 372 IPR045869 GO:0016831
Arst8g01952 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 370 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01952 Arst-Chr8 27986403 27989595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01952 16 382 Miscellaneous Gene Families AT1G02000 21.608 2.02e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01952 K12449 - gmx:100792879 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01952 8 27986403 27989595 Arst8g01952 8 27986403 27989595 ECH
Arst8g01952 8 27986403 27989595 Arst3g00084 3 609151 612314 PCT