Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00084 ATGGCTTCTTCTGCTTCTGTTGGTGCCTCAGCTCGCGTGGATCTGGATGGGAACCCGATAAAGCCATTAACGATCTGCATGATCGGTGCCGGAGGGTTCATTGGCTCACACCTTTGCGAGAAGCTCATGTCCGAAACGCAGCACAAGGTTCTCGCATTGGATGTCTACAACGACAAGATCAAGCACCTCTTGGAGCCCGATAACCTTCCATGGCACGGTCGCATCACCTTCCACCGACTCAACATCAAGCACGATTCAAGGCTCGAAGGTCTCATCAAGATGTCGGATCTGACGATAAATCTGGCTGCAATTTGCACCCCTGCGGATTACAATACCCGTCCCCTTGACACAATTTACAGCAACTTCATCGATGCTCTCCCTGTGGTGAAGTACTGCTCTGAGAATAACAAGAGGCTTATTCACTTCTCTACTTGTGAAGTGTATGGGAAAACGATTGGAAGCTTTCTCCCCAAAGATAGTCCTCTTCGTCAGGATCCTGCATACTACGTTCTTAAAGAAGATGAGTCTCCATGCATTTTTGGTTCGATTGAGAAGCAGAGATGGTCCTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGTATGGAGTTCACAATTGTGAGGCCTTTTAATTGGATTGGACCTAGAATGGATTTCATTCCTGGCGTTGATGGTCCTAGTGAGGGTGTTCCCCGGGTTCTTGCATGCTTTAGCAATAATCTTCTCAGAGGGCAGCCCCTCAAGCTAGTGGACGGTGGCCAATCCCAGAGAACCTTTGTTTACATCAAGGATGCTATTGAAGCTGTAACACTGATGATTGAAAACCCTGCCAGGGCTAATGGACATATCTTCAATGTGGGTAACCCCAACAATGAGGTTACAGTTCGGCAGCTTGCTGAAATGATGATTAAGGTATACTCAAAGGTAAGTGGAGAACAACCTCCAGAGACGCCTACAATCGACGTCAGCTCGAAAGAATTTTATGGCGAGGGATATGACGATAGCGACAAGAGAATTCCTGACATGACCACAATAAACAGGCAACTTGGATGGAACCCAAAGACCTCACTTTGGGACCTGCTTGAGTCCACACTGACCTATCAGCACAGGACATATGCTGAAGCCATTAAGAAAGTCATTGCTAAACCTGTTGCAAGTTGA 1185 0.4709 MASSASVGASARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETQHKVLALDVYNDKIKHLLEPDNLPWHGRITFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGMEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRGQPLKLVDGGQSQRTFVYIKDAIEAVTLMIENPARANGHIFNVGNPNNEVTVRQLAEMMIKVYSKVSGEQPPETPTIDVSSKEFYGEGYDDSDKRIPDMTTINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00084 394 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 24 379 - -
Arst3g00084 394 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 23 386 - -
Arst3g00084 394 Pfam NAD dependent epimerase/dehydratase family 25 295 IPR001509 -
Arst3g00084 394 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 377 IPR036291 -
Arst3g00084 394 CDD Arna_like_SDR_e 24 379 IPR045869 GO:0016831
Arst3g00084 394 Gene3D - 23 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00084 Arst-Chr3 609151 612314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00084 7 389 Miscellaneous Gene Families AT1G02000 21.130 3.66e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00084 K12449 - gmx:102667779 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01952 8 27986403 27989595 Arst3g00084 3 609151 612314 PCT