Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01945 ATGGCGGCTGGTTTTGTGGCGTGGGTGGTGGTGTTCTTGTTAGGGGCGGCGACGGCGGCGGTTGGTGGATCTCCGGCGACGCTGAGCTTGGAGAGGGCGTTTCCGACGAATCATGGAGTGGAGCTGAGTCAGCTGAGAGCACGTGACATGCTGAGGCACAGAAGAATGCTTCAGTCCACTAATAATGGGGTCATTGATTTCCAAGTTCAAGGCACCTTCGATCCCTTCCAAGTCGGGTTGTACTATACAAAAGTGCAGTTGGGTTCTCCTCCAGTTGATTTCTATGTGCAGATTGACACTGGCAGTGATGTTCTCTGGGTTAGCTGCACCTCTTGCAATGGTTGTCCCCAAACAAGTGGCCTTCAGATTCCACTCAATTTCTTCGATGCATCGCGTTCATCGACGTCTTCGATGATCTCTTGCTCGGATCAGAGGTGCAACACTGGAGTTCAATCATCAGATGCAACCTGTTCCAGTCAGGGTAACCAGTGCTCCTATAGTTTCCAGTATGGAGATGGTAGTGGTACATCGGGCTACTATGTTTCGGATTTGATGCATTTCAACACTATTTTTGAGGGATCTGTATCTTCAAATTCCACGGCATCTGTTGTTTTTGGATGTAGCACAGAGCAGAGCGGGGACTTGACAAAGTCTGATAGAGCTGTCGCTGGCATATTTGGATTCGGACAACAAGGTTTGTCTGTTATCTCCCAACTTTCCTCGCAAGGAGTAGCTCCAAATGTGTTCTCTCACTGTCTGAAAGGAGATAGCAGTGGTGGCGGCATATTGGTTCTTGGTGAGATTGTGGAGCCAAACATTGTTTATACTTCACTTGTAGCATCACAGCCACATTACAATTTGAATCTGCAGAGTATCTCTGTCAACGGCCAGAAGTTACAAATTGATTCATCAGTTTTTGCAACATCAAGCAACAAAGGTACCATTGTTGATTCTGGAACAACTTTGGCATATCTTGCTGAGGAAGCTTATGATCCCTTTGTCAATGCGATTACGTCTTCAATTCCACAATCCGTAAGCAGTGTTAATTCCAAGGGAAACCAGTGTTACTTAGTCACTGGCAGTGTGTCTGATATTTTTCCTCAAGTGAGTCTGAACTTTGCGGGAGGTGCATCCATGGATTTAAAACCACAAGACTATCTTATACAGCAGAGTTCTAGTGGTGGTGCAGCAGTATGGTGTATTGGCTTTCAGAAAATCTCTGGTCAAGATGTTACAATTCTAGGAGACCTTGTATTGAAAGACAAAATCGTTGTTTATGATCTTGCTGGTCAACGCCTTGGATGGGCTCCCTATAACTGTGGTTCGTCAGTTAATGTGTCTGCAAATACTGGCACTGGAAGAAGTGAATATGTGAATGCTGGAGAACTAAGTGGCAGCACTTCTTCACATGAAGGACTTAACAAGCTGATAAACATAGGGTTCTTAGCTTTAACACTGATTTGCTACATAGTGATCTTATAG 1482 0.4521 MAAGFVAWVVVFLLGAATAAVGGSPATLSLERAFPTNHGVELSQLRARDMLRHRRMLQSTNNGVIDFQVQGTFDPFQVGLYYTKVQLGSPPVDFYVQIDTGSDVLWVSCTSCNGCPQTSGLQIPLNFFDASRSSTSSMISCSDQRCNTGVQSSDATCSSQGNQCSYSFQYGDGSGTSGYYVSDLMHFNTIFEGSVSSNSTASVVFGCSTEQSGDLTKSDRAVAGIFGFGQQGLSVISQLSSQGVAPNVFSHCLKGDSSGGGILVLGEIVEPNIVYTSLVASQPHYNLNLQSISVNGQKLQIDSSVFATSSNKGTIVDSGTTLAYLAEEAYDPFVNAITSSIPQSVSSVNSKGNQCYLVTGSVSDIFPQVSLNFAGGASMDLKPQDYLIQQSSSGGAAVWCIGFQKISGQDVTILGDLVLKDKIVVYDLAGQRLGWAPYNCGSSVNVSANTGTGRSEYVNAGELSGSTSSHEGLNKLINIGFLALTLICYIVIL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01945 493 Gene3D Acid Proteases 268 447 IPR021109 -
Arst8g01945 493 FunFam Aspartic proteinase-like protein 2 268 447 - -
Arst8g01945 493 Pfam Xylanase inhibitor C-terminal 284 436 IPR032799 -
Arst8g01945 493 PRINTS Pepsin (A1) aspartic protease family signature 314 325 IPR001461 GO:0004190|GO:0006508
Arst8g01945 493 PRINTS Pepsin (A1) aspartic protease family signature 412 427 IPR001461 GO:0004190|GO:0006508
Arst8g01945 493 PRINTS Pepsin (A1) aspartic protease family signature 87 107 IPR001461 GO:0004190|GO:0006508
Arst8g01945 493 ProSiteProfiles Peptidase family A1 domain profile. 81 436 IPR033121 -
Arst8g01945 493 CDD pepsin_A_like_plant 81 440 IPR034161 -
Arst8g01945 493 Gene3D Acid Proteases 57 267 IPR021109 -
Arst8g01945 493 Pfam Xylanase inhibitor N-terminal 81 266 IPR032861 -
Arst8g01945 493 FunFam Aspartic proteinase-like protein 2 64 267 - -
Arst8g01945 493 PANTHER ASPARTYL PROTEASES 24 434 IPR001461 GO:0004190|GO:0006508
Arst8g01945 493 SUPERFAMILY Acid proteases 76 444 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01945 Arst-Chr8 27914098 27918150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01945 54 440 Miscellaneous Gene Families AT1G44130 27.363 2.53e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01945 - - gmx:100791299 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01945 8 27914098 27918150 Arst8g01945 8 27914098 27918150 ECH
Arst8g01945 8 27914098 27918150 Arst3g00088 3 633472 637391 PCT