Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00088 ATGAATCCAACCAAAAATAACAACCACCTCCTTAACGATAACCTTAACCTTTGTTCTCTTTTACTCTTTGTTCTTACACTTCTCTTCTCCGCCGTACTGCTGCTTCTTCTAGCTCCGGCGGTGTGGCCTTCTCCGGTGACTCTCCCGCTCGAGCGAGCTTTTCCGACCAACCATGGAGTGGAGTTGAGCCAGCTCAAAGCATGGGACTCTGTCAGACATCGAAGGCTGTTGCAGCAAACAACAACTACCTATGTTGTCGATTTCCCTGTTAGGGGCACCTTCGATCCATCCCAAGTCGGGCTTTACTATACAAAGGTGAGGTTGGGTTCTCCTCCAAGGGAGTTTCATGTGCAGATTGACACTGGCAGTGATGTTCTTTGGGTTAGTTGTGGTTCCTGCAATGGTTGCCCTGAGACAAGTGGCCTTCAAATTCAGCTCAATTATTTTGACCCGGGGAGTTCATCAACATCCTCATTGATCTCTTGTTTGGACCAAAGGTGTAGGAGTGGAGAGGAGTCCTCGGATACGAGCTGTTCTACTCAGAGCAACCAATGCACTTACACATTCCAGTATGGAGATGGTAGTGGGACTTCAGGCTATTATGTATCAGACTTGATGCATTTTGCAAGTATTTTCGAGGGATCCGTGACAGCAAATTCTTCTACGCCTATAGTTTTTGGTTGTAGCAATCTACAGACTGGGGAATTGACTAAGTCTGATAGAGCGATCGATGGAATATTTGGATTTGGGCAGCAGGAAATGTCTGTCATCTCCCAGCTCTCTTCGCAAGGAATAGCCCCGAGAGTGTTCTCGCATTGCCTGAAGGGTGATAATAGTGGTGGGGGGATATTGGTACTCGGAGATATTGTGGAACCAAACATAATTTATAGTCCACTTGTTCCATCACAGCCTCATTACAATTTAAATCTGCAGAGCATCTCTGTCAATGGTCAACCATTGCCAATTGATCCTACAGTTTTTGCTACATCAAGCAACAGAGGTACCATTATAGATTCTGGAACAACTTTGGCATACCTTGCCGAAGAGGCTTACAACCCGTTTGTCAATGCGATTGTAGCTGCAGTTCCACCATCTGTACGCACTGTTCTTTCCAAGGGAAGTCCGTGCTTCTTAATATCCAGCAGTGTTTCCGACACATTTCCTCAAGTAAGTCTGAATTTTGCCGGTGGTGCATCTTTGGTTCTAAGACCACAGGACTACCTCATACAACAGAATCCTATTGTTGATGGAGCAGTGTGGTGTATTGGCTTTCAAAAAATCCCAGGTGAAGGCATAACAATTCTAGGAGACCTTGTATTAAAAGATAAAATTTTTATCTATGATCTTGCTCATCAGCGCATTGGGTGGACTAACTATGACTGTTCGTTGTCCGTTAACGTCACTGCATCAACGGGGGGAGGAAGAAGTGAATTTGTGAATGCAGGAGAGCTAAGTGGAAGCACTTCTTTACAAGATGGACCTCACAAGTTGATACACATTGGGGTCATGGCTTTCTTCTTATACCTTCTAGTTTTGTAG 1539 0.4496 MNPTKNNNHLLNDNLNLCSLLLFVLTLLFSAVLLLLLAPAVWPSPVTLPLERAFPTNHGVELSQLKAWDSVRHRRLLQQTTTTYVVDFPVRGTFDPSQVGLYYTKVRLGSPPREFHVQIDTGSDVLWVSCGSCNGCPETSGLQIQLNYFDPGSSSTSSLISCLDQRCRSGEESSDTSCSTQSNQCTYTFQYGDGSGTSGYYVSDLMHFASIFEGSVTANSSTPIVFGCSNLQTGELTKSDRAIDGIFGFGQQEMSVISQLSSQGIAPRVFSHCLKGDNSGGGILVLGDIVEPNIIYSPLVPSQPHYNLNLQSISVNGQPLPIDPTVFATSSNRGTIIDSGTTLAYLAEEAYNPFVNAIVAAVPPSVRTVLSKGSPCFLISSSVSDTFPQVSLNFAGGASLVLRPQDYLIQQNPIVDGAVWCIGFQKIPGEGITILGDLVLKDKIFIYDLAHQRIGWTNYDCSLSVNVTASTGGGRSEFVNAGELSGSTSLQDGPHKLIHIGVMAFFLYLLVL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00088 512 Pfam Xylanase inhibitor N-terminal 102 288 IPR032861 -
Arst3g00088 512 FunFam Aspartic proteinase-like protein 2 85 288 - -
Arst3g00088 512 ProSiteProfiles Peptidase family A1 domain profile. 102 457 IPR033121 -
Arst3g00088 512 Pfam Xylanase inhibitor C-terminal 305 457 IPR032799 -
Arst3g00088 512 Gene3D Acid Proteases 289 469 IPR021109 -
Arst3g00088 512 PANTHER ASPARTYL PROTEASES 32 455 IPR001461 GO:0004190|GO:0006508
Arst3g00088 512 SUPERFAMILY Acid proteases 99 464 IPR021109 -
Arst3g00088 512 Gene3D Acid Proteases 77 288 IPR021109 -
Arst3g00088 512 PRINTS Pepsin (A1) aspartic protease family signature 433 448 IPR001461 GO:0004190|GO:0006508
Arst3g00088 512 PRINTS Pepsin (A1) aspartic protease family signature 108 128 IPR001461 GO:0004190|GO:0006508
Arst3g00088 512 PRINTS Pepsin (A1) aspartic protease family signature 335 346 IPR001461 GO:0004190|GO:0006508
Arst3g00088 512 FunFam Aspartic proteinase-like protein 2 289 468 - -
Arst3g00088 512 CDD pepsin_A_like_plant 102 461 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00088 Arst-Chr3 633472 637391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00088 86 462 Miscellaneous Gene Families AT1G44130 27.595 1.81e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00088 - - gmx:100811632 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01945 8 27914098 27918150 Arst3g00088 3 633472 637391 PCT