Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01917 ATGCCATCATTGTTTTCCTCTTCTCTCCTTCAAATGCCTCCTCTTCTATTCTCTCTTATACTCTCACTCATGCTTTGTGGAATCATTGCTGATGAGTCTCCACCTTCACCTGGCTACTACCCTAGTTCCCAAGTTAGTTCTGTTGCCTTTGATCAAGCTTATAGAAACCTTTGGGGACCTCAGCACCAAAGACTAGACCAATCTGGCTCACTAACTATTTGGCTTGACTCTTACTCTGGAAGTGGATTCAAGTCAATCCGGCCGTATCGATCCGGATACTTTGGTGCTGCCATTAAGCTTCAATCTGGTTACACTGCAGGAGTGATTACATGTCTCTATCTTTCAAACAACCAAGACTACCCAGGAGACCATGATGAAGTGGACATTGAGTTCCTTGGTACCATCCCAGATAAGCAATATGTGCTGCAGACAAATGTGTTCATGCGAGGAAGCGGAGACAAGAATAATGTGATAGGAAGAGAGATGAGGTTTCACCTTTGGTTCGATCCAACACAAGATTTTCACCACTATGCTATTCTATGGACACCCACTGACATCATATTTTTGGTGGACGATGTTCCAATAAGGAATTACCCAAGAAAGAATGATGCAACATTCCCTGAAAGAGCAATGTACGTGTACGGATCGATATGGGACGCATCATCATGGGCCACAGAGAATGGGAAATACAAAGCTGATTACAAATACCAACCATTCATTGGAAGATACAAAGATTTCAAGCTCCAAGGTTGCACCACTCAATCCTCCTCCTCATGCCAGCCACCCTCACCTTCACCACCTGGCTACAATTCACTAAGCCCTCAACAGTATAATGCAATGCAATGGGTCCAAAACAATTACTTGGTCTATGACTATTGCCGTGATCCCACTAGAGACCATACCCTTACTCCAGAATGCTAA 921 0.4387 MPSLFSSSLLQMPPLLFSLILSLMLCGIIADESPPSPGYYPSSQVSSVAFDQAYRNLWGPQHQRLDQSGSLTIWLDSYSGSGFKSIRPYRSGYFGAAIKLQSGYTAGVITCLYLSNNQDYPGDHDEVDIEFLGTIPDKQYVLQTNVFMRGSGDKNNVIGREMRFHLWFDPTQDFHHYAILWTPTDIIFLVDDVPIRNYPRKNDATFPERAMYVYGSIWDASSWATENGKYKADYKYQPFIGRYKDFKLQGCTTQSSSSCQPPSPSPPGYNSLSPQQYNAMQWVQNNYLVYDYCRDPTRDHTLTPEC 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01917 306 PIRSF EndGlu_transf 15 306 IPR016455 GO:0010411|GO:0016762|GO:0042546
Arst8g01917 306 Pfam Glycosyl hydrolases family 16 51 235 IPR000757 GO:0004553|GO:0005975
Arst8g01917 306 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 270 306 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Arst8g01917 306 Gene3D - 30 306 - -
Arst8g01917 306 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 306 IPR013320 -
Arst8g01917 306 FunFam Xyloglucan endotransglucosylase/hydrolase 37 306 - -
Arst8g01917 306 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 29 243 IPR000757 GO:0004553|GO:0005975
Arst8g01917 306 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 47 306 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01917 Arst-Chr8 27626465 27628080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01917 19 306 Glycoside Hydrolase AT3G44990 66.441 4.19e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01917 K08235 - gmx:100796768 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01917 8 27626465 27628080 Arst8g01917 8 27626465 27628080 ECH
Arst8g01917 8 27626465 27628080 Arst3g00136 3 930625 932910 PCT