Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00136 ATGCTGCCATCATCACCCCTTTCTTTCTTCTTCTTCTTCTTCCTTCTTGTACTCTCATTCATGATATGTGCTAGTGCTCAGGGTCCACCTTCACCTGGCTACTACCCTGGTTCCAAAATTAGTCCTATTAGCTTTGATCAAGGGTTCAGAAGCCTATGGGGACCTCAGCATCAGAGGCTAGAACAAGGCACATTATCAATATGGCTAGATTCTAACTCGGGGAGTGGATTCAAGTCACTTCACTCTTATCAATCTGGATACTTTAGTGCTGCAATTAAGCTTCAACCCGGTTATACTGCAGGGGTCATTACAACTCTTTATCTTTCAAACAACCAAGATCACCCCGGAAATCACGACGAAATCGACATTGAGTTCCTAGGTACCACCCCTGATAAGCCATATGTTCTGCAGACAAATGTATACATAAGAGGAACTGGTGATGGCAACATTGTAGGGAGAGAGATGAGGTTTCATCTTTGGTTTGATCCAACACAAGATTTTCACATCTATGCTATTCTATGGAAACCAAGTGAGACAATATTTTTTGTGGATGATGTTCCCATAAGGAGGTACCCTAGGAAAGGTGATGCTACATACCCAAATAGACCAATGTATGTGTATGGATCAATATGGGATGCATCTTCATGGGCAACAGAAGATGGAAAATACAAAGCAAATTATAAATACCAACCCTTCATTGGAAGGTACAAGAACTTCAAGCTCCAAGGTTGCACCATTAATGAAAGCCCTTCCTCATGCAAGCCACCATCTGCATCACCATTAGGGTATGGAAGTCTTAGTCTTCAGCAAATTTCAGCCATGAAATGGGTCCAAAACCACTACTTGGTCTATTATTATTGCCATGACCCTAAGAGAGATCATACTCTTACCCCAGAGTGCTAG 903 0.4208 MLPSSPLSFFFFFFLLVLSFMICASAQGPPSPGYYPGSKISPISFDQGFRSLWGPQHQRLEQGTLSIWLDSNSGSGFKSLHSYQSGYFSAAIKLQPGYTAGVITTLYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGTGDGNIVGREMRFHLWFDPTQDFHIYAILWKPSETIFFVDDVPIRRYPRKGDATYPNRPMYVYGSIWDASSWATEDGKYKANYKYQPFIGRYKNFKLQGCTINESPSSCKPPSASPLGYGSLSLQQISAMKWVQNHYLVYYYCHDPKRDHTLTPEC 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00136 300 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 300 IPR013320 -
Arst3g00136 300 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 39 300 IPR044791 GO:0004553
Arst3g00136 300 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 265 300 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Arst3g00136 300 Gene3D - 25 300 - -
Arst3g00136 300 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 24 236 IPR000757 GO:0004553|GO:0005975
Arst3g00136 300 Pfam Glycosyl hydrolases family 16 46 228 IPR000757 GO:0004553|GO:0005975
Arst3g00136 300 FunFam Xyloglucan endotransglucosylase/hydrolase 33 300 - -
Arst3g00136 300 PIRSF EndGlu_transf 6 300 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00136 Arst-Chr3 930625 932910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00136 10 300 Glycoside Hydrolase AT3G44990 63.946 3.48e-139 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00136 K08235 - gmx:100781528 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01917 8 27626465 27628080 Arst3g00136 3 930625 932910 PCT