Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01910 ATGGCCAAGTTAAGTGCTAGAAGCATGAAGAAGAGTGCTACTAGTAACAGTTTTAGGTTTGTGGTGGAAAAACTAATTCATAAGAGTTTGTTAATGGGGAGCAACAACAAGAAGTCATCATCTTGTAATGATTGTGTGCCTGAGGATGTGAAAGAAGGACATTTTGCAGTGATTGCTGAGGGTGGTGGTGATGATGAGGAAGCTCCAAAGAGGTTGGTGATGCCACTGAGTTGTTTGAGAAACCCAGCATTCTTGAGGCTATTGGAACAGGCTGAAGAGGAGTATGGCTTTGACCATGAAGGTGCACTCACCATTCCTTGCACCCCTTCTCAACTTCAAAGGATACTACTTCTTGAACAGCAACAAACTACCAACAACAACAACCACCTCTTCAACTTCTCAACTAATCACCTCCAATTCATCATCTCATAA 432 0.4236 MAKLSARSMKKSATSNSFRFVVEKLIHKSLLMGSNNKKSSSCNDCVPEDVKEGHFAVIAEGGGDDEEAPKRLVMPLSCLRNPAFLRLLEQAEEEYGFDHEGALTIPCTPSQLQRILLLEQQQTTNNNNHLFNFSTNHLQFIIS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01910 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 116 IPR003676 GO:0009733
Arst8g01910 143 Pfam Auxin responsive protein 34 116 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01910 Arst-Chr8 27505678 27506109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01910 21 116 Calmodulin-binding Proteins AT3G43120 35.644 6.36e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01910 - K14488 aip:107612303 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01910 8 27505678 27506109 Arst8g01910 8 27505678 27506109 ECH
Arst8g01910 8 27505678 27506109 Arst3g00148 3 1027444 1029076 PCT