Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00148 ATGATCATGATTATGGCTGAGGTGACAGCAAGAAATAGAAGTAGCAGCAGCAACAAAAAAAAGGGTTTAAGTGGTGGCATGTTGAAGTTCAAGATTCTGTTGGAAAAGCTTCATAAAGTTGTGTTATTACTAGTAGGTAAAAATAATAAACCAAGCTCATCATATGTGAAAGAAGGCCATTTCGCTGTGATTGCTACTGTTGAAGGACCAAAGAGGTTCTTGGTGCCATTGAGGTGTTTGAGAAACCCTACATTCTTGAGTTTGTTGGAGAGAGCAGCTGAAGAGTATGGTTTTGATCAGCTTGGTGCAATTACCATTCCTTGCAACCCTAGTGACATTGAGACCTTACTGGCTCATCATCAAGTGGAGAAAGAGGAAGATGAAAATGCCAGAGAGGATTTGATCTAG 408 0.402 MIMIMAEVTARNRSSSSNKKKGLSGGMLKFKILLEKLHKVVLLLVGKNNKPSSSYVKEGHFAVIATVEGPKRFLVPLRCLRNPTFLSLLERAAEEYGFDQLGAITIPCNPSDIETLLAHHQVEKEEDENAREDLI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00148 135 Pfam Auxin responsive protein 47 118 IPR003676 GO:0009733
Arst3g00148 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00148 Arst-Chr3 1027444 1029076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00148 25 118 Calmodulin-binding Proteins AT4G34750 34.043 2.79e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00148 K14488 - csv:101212725 103.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00148 3 1027444 1029076 Arst3g00148 3 1027444 1029076 ECH
Arst8g01910 8 27505678 27506109 Arst3g00148 3 1027444 1029076 PCT