Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01650 ATGGCTGAGAAGCAGAAACCGTCTTCATCAACTTCATCAGGGGATTGGAGGAGAATACCACTTTGCACTTTCTTTAAGGATACCAGACAAGTTTTCAAATTAGATAGTCTTGGTCGTGAAATATTGTCTATTGCACTGCCTGCAGCAATGGCTTTGACAGCAGACCCCATAGCTTCACTGGTTGACACAGCATTCATAGGCCGAATTGGTGCAGTGGAGCTTGCTGCTGTAGGAGTTTCAATAGCTCTCTTCAATCAAGTGTCAAGGATTGCAATATTCCCCCTTGTCAGTTGCACAACCTCTTTTGTGGCTGAAGAAGACAGCATCACCGGAGCAAGCCCTCCAGTAGATGAAAGCGAAACCATGGAAGCAGGTCCACCCTCTGATGCTGAAACCAAAGAGTTCCTACCCCAGAAAGGTACCGTTGTTGGAAGTATTCAGAAACTAGATTTGGCTGGTGAAAGCTTTGACACAGTTGAGGAGGCGCAACAAAAGAAAAGGCATATCCCTTCGGCTTCATCTGCAATATTTATCGGCGGCATCCTTGGCCTCATCCAGGCAGTACTACTTATATCTGCAGCAAAACCTTTATTGAACTTCATGGGAGTAGCTTCTGACTCTCCTATGCTACACCCTGCGCAACGGTACCTGACACTGCGGTCCCTTGGTGCTCCTGCGGTTCTTCTTTCGTTGGCGATGCAGGGAGTCTTCAGAGGATTTAAGGACACTAGAACTCCTCTATATGCTACTGTGGCTGGAGATGTTACCAATATAGCATTAGATCCTTTATTCATGTTTGTATTTCGCTTAGGCGTCAGCGGTGCAGCCATTGCCCATGTTATATCTCAGTACCTTATTTCAGTTATACTTCTATGGAGGTTGATGGAACAAGTTGATCTTATTCCTCCAAGCATCAAGCATTTGAGATTTGACCGATTTCTTAGAAATGGTTTCCTATTGTTAATGAGAGTCATTGCTGTAACATTCTGTGTGACGCTGGCCGCGTCTTTAGCTGCACGCCACGGATCAACATCCATGGCAGCTTTTCAAGTGTGCTTACAGATTTGGCTGGCAGTGTCTCTTCTAGCTGATGGTCTGGCTGTTGCTGGGCAGGCTATTCTTGCGGGTGCATTTGCTAATAAGGACTATGAGAAGGCCACAGCAACTGCTTCTCGAGTATTGCAGATGGGATTGGTTCTAGGTGTGGGACTTGCATTTATTCTTGGAACAGGATTGCACTTTGGAGCTAAGCTGTTTACTGAAGATGTTAAAGTCCTCCATTTCATTAGAATGGGGATACCGTTTGTAGCATTAACACAACCCCTGAACTCATTGGCATTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTCGCATATTCAGCCTTCTCTATGATTGTGGTGGCCATCATTAGCATAGTATGTTTACTTATCATGTCATCTGCTGGTGGTTTCATTGGAATATGGATCGCTTTGACAATTTATATGTCTCTTAGGGCCTTTGCTGGCTTCTTGAGGATTGGAACAGGATCAGGACCTTGGGAATTCCTATGGAGATGA 1563 0.4491 MAEKQKPSSSTSSGDWRRIPLCTFFKDTRQVFKLDSLGREILSIALPAAMALTADPIASLVDTAFIGRIGAVELAAVGVSIALFNQVSRIAIFPLVSCTTSFVAEEDSITGASPPVDESETMEAGPPSDAETKEFLPQKGTVVGSIQKLDLAGESFDTVEEAQQKKRHIPSASSAIFIGGILGLIQAVLLISAAKPLLNFMGVASDSPMLHPAQRYLTLRSLGAPAVLLSLAMQGVFRGFKDTRTPLYATVAGDVTNIALDPLFMFVFRLGVSGAAIAHVISQYLISVILLWRLMEQVDLIPPSIKHLRFDRFLRNGFLLLMRVIAVTFCVTLAASLAARHGSTSMAAFQVCLQIWLAVSLLADGLAVAGQAILAGAFANKDYEKATATASRVLQMGLVLGVGLAFILGTGLHFGAKLFTEDVKVLHFIRMGIPFVALTQPLNSLAFVFDGVNFGASDFAYSAFSMIVVAIISIVCLLIMSSAGGFIGIWIALTIYMSLRAFAGFLRIGTGSGPWEFLWR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01650 520 CDD MATE_DinF_like 37 510 IPR044644 -
Arst8g01650 520 MobiDBLite consensus disorder prediction 109 133 - -
Arst8g01650 520 NCBIfam MATE family efflux transporter 47 490 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g01650 520 Pfam MatE 322 475 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g01650 520 Pfam MatE 166 263 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst8g01650 520 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 7 519 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01650 Arst-Chr8 25215982 25220519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01650 K26938 - gmx:100780165 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01650 8 25215982 25220519 Arst8g01650 8 25215982 25220519 ECH
Arst8g01650 8 25215982 25220519 Arst3g00423 3 2955068 2958664 PCT