Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00423 ATGGCTGACAAACTCATTTCAATACAAGATGGGAGCAGAATTCCAATTTGCAGTTTATTTAGGGATACCAGACTTGTTTTCAAAGCAGACAACCTTGGTTGGGAAATATTGTCAATTGCAGTGCCTTCTGCTATGGCTTTGACAGCTGATCCTATTGCTTCACTGGTTGACACAGCATTCATTGGCCGAATAGGTGCAGTGGAGCTTGCAGCTGTAGGAGTATCCATAGCTCTCTTCAATCAAATATCAAGGATTGCAATTTTCCCACTCGTCAGTGTGACTACTTCTTTTGTGGCTGAGGAAGATGCCCTTACAGCAGCCAGCCCTCTGGTAGAGGATGGTGAATCCTTGGAAGAAGGTTCCATTCTGAAAGCTGAAATCAATGAACTTATACCAGATAAAGATGGAGATGTTCAGAAACCAAATTTGATCCATATGGACTCAAATGTAGTTAAGGTTGAGCATAAGAGAAGGCATATCCCTTCTGCATCATCTGCATTGGTTATTGGTGGTATTCTTGGCCTTTTCCAGGCAATATTCCTCATATTTGCAGCAAAACCTTTATTGCACTTCATGGGAGTAAATTATGACTCTCCCATGCTCAAACCTGCACAGAACTACCTGACATTGAGATCTCTTGGCGCGCCGGCTGTTCTTCTCTCGTTAGCAATGCAGGGAGTCTTCCGAGGATTTAAAGACACTAAAACACCTCTATGTGCAACTTTGGCAGGAGATTTGACCAACATAGCACTGGATCCTTTGTTCATGTTTGTATTCCGCTTAGGTGTTAGTGGTGCAGCCATTGCTCATGTTATATCTCAGTACCTAATTTCTGTAATACTCCTGTGGAAATTGATGCAAAAAGTTGATCTTATGCCTCCCAGCATCAAGCATCTGCAGTTTGATCGATTTCTCAAAAATGGTTTTCTGTTGTTAATGAGAGTAACTGCTGTAACATTCTGTGTCACTCTGGCCACCTCACTAGCTGCACGCCAGGGATCAAAATCTATGGCTGCATTTCAAGTCTGCCTGCAGATTTGGCTGGCAGTATCTCTTCTTGCCGATGGTCTTGCTGTTGCTGGGCAGGCAATTCTTGCAGGCGCATTTGCTGCCAAGGACTATGACAAGGCCACTGAGACTGCGGCTCGAGTATTACAGATGGGTTTGGTTCTGGGATTGGCTCTTGCATTCATTCTTGGTGCAGGACTTCCTTTTGGAGCTAAACTATTTACAAGAGATGTTGATGTCCTCCACCTCATAAAAATTGGAATACCTTTTGTTGCAGCCACCCAACCCATCAATGCTTTGGCATTTGTATTTGATGGTATTAACTTTGGTGCATCTGACTTTGCATATTCAGCATTCTCTTTGCTTATAGTGGCAGTTGTCAGCATCATTTGCCTACTATTTTTATCAGCATCATTCATAGGAATTTGGGTTGCTTTGACCATCTATATGGGTCTTAGAGCATTTGCTGGCTTCTTGAGGATTGGAACAGGATCAGGACCTTGGAAGATCCTTAGGAAGTGA 1530 0.4314 MADKLISIQDGSRIPICSLFRDTRLVFKADNLGWEILSIAVPSAMALTADPIASLVDTAFIGRIGAVELAAVGVSIALFNQISRIAIFPLVSVTTSFVAEEDALTAASPLVEDGESLEEGSILKAEINELIPDKDGDVQKPNLIHMDSNVVKVEHKRRHIPSASSALVIGGILGLFQAIFLIFAAKPLLHFMGVNYDSPMLKPAQNYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLCATLAGDLTNIALDPLFMFVFRLGVSGAAIAHVISQYLISVILLWKLMQKVDLMPPSIKHLQFDRFLKNGFLLLMRVTAVTFCVTLATSLAARQGSKSMAAFQVCLQIWLAVSLLADGLAVAGQAILAGAFAAKDYDKATETAARVLQMGLVLGLALAFILGAGLPFGAKLFTRDVDVLHLIKIGIPFVAATQPINALAFVFDGINFGASDFAYSAFSLLIVAVVSIICLLFLSASFIGIWVALTIYMGLRAFAGFLRIGTGSGPWKILRK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00423 509 Pfam MatE 316 466 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst3g00423 509 Pfam MatE 162 254 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst3g00423 509 NCBIfam MATE family efflux transporter 42 479 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst3g00423 509 CDD MATE_DinF_like 32 499 IPR044644 -
Arst3g00423 509 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 15 508 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00423 Arst-Chr3 2955068 2958664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00423 K26938 - gmx:100780165 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01650 8 25215982 25220519 Arst3g00423 3 2955068 2958664 PCT