Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00940 ATGAGGGTCATGAATCTTGAGAGTCCTCTAAAGACTGAGACTGAGGAAGCTTATGAAGGGGAAGACGAGCGCGAAGATTCGCATTCCCTCAAAAGGGATCTATCTGATATTGATCTCCAAGCTCATGAAGCTGCTGTGTCAAGGGAAGTAAGGTCTGATCGAAGTCCAGCAACGGATAAAGAGACGAAATACAGCGAAAAGAGCGGCGAACTAGTGCAAAGTGGGCATGTCAGTGATCCTGGGATTATTGGGAGGGAAGACTTCTGGGATTCTCCCAAGCTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATGTTCTTGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTGAAAGCCCCAGGTCTGTGATGACTCACTGCAGTGCTGATAGAGTTATGTTGAGAAGGCATTCCTCAAGCCAAGTTCTTCCTTCCGGAAGCAAGAGACTCTGGTGGAAGATGTTCCTCTGGAGCCATAGGAACATACATAGACCTATTCCAAGCAAATCAACACAGGTGAATCCTGGTGTGGCTGCAACGCACAATCCATACGGGTACTCTTCCGACACCCTTGAACCGAAGCACAAGCAATCACCAAGAAATGTGGAATCACCCTCACCAAGGTCATCAAATGGTGAATACTTTCGCAAAAGCTATAGTGATAAAAACATTGATCACCAAAGGAGGAGCAGATTCCAGGAGGAGAGTTTCGGTTTTTGGCCACAGAATCAATGGGTAGCCTTCTCAGGAGGATCATCATCCTTCAATAGAGTGGAGGAGTGGGTGCATGATCTTGAAATTCAGCAGGTGCCTCCAGAGGATAATTTTGATAATGACAATGTGGGAAACATTGAGTTCCCACCTTCTCCTAATGCTGGTAGATCAATGTCAAGAACCGTATCTCAGTTAAGTCACCATACAGATGCAAATCTTTCAAAGGAGATTCTGCATGCCAATAGTTTGGTCCAATCCCTAAATCCAGCCTCAACTGTGGCTCATATATCTGGTGTTGGTATAAAAGCGATTCCTGGTATTTCACACTTCTCCAGCCTCCGCTCTGTCAATTTGTCCAACAATTTCATAGTTCAAATTGTGCCTGGACTTCTCCCAAAGGGTATTCATACACTTAATTTGTCAAGAAATAAGATCAGCACCATTGAGGGGCTTAGAGATTTAACCCGGTTACGAGTACTTGACTTGAGTTACAATCGCATCTCAAGAATTGGACAAGGTTTATCAAATTGCACACTTATCAAAGAGCTATATCTTGCTGGGAATAAGATAAGTGATGTTCAGGGACTACACAGATTACTGAAGCTAACAGTTCTGGATTTGAGCTTCAACAAGATCACAACAACAAAAGCATTAGGGGAACTTGTAGCTAACTACAACTCACTTCAGGCCTTGAATCTGCTTGGAAATCCAGTTCAAAACAACATCAGTGACGAGCAGTTGCGGAAATCAGTTTGCAGTCTTCTTCCGAAGCTTGGATACCTGAACAAGCAAGCCATCAAGCCTCAGAGGGCACGAGAAGTACTCACTGACAGTGTTGCCAAAGCTGCACTTGGTGACAGCAGCCGGAACTACAACCGAAAATCACCGAAGAGAGGCAACCATGGAGGTCCCAGTTCCTCAAATGCGCATAGAAGCAGTACTAGTGTTGTCCAGAAAAGTAAGAGCATGCCAAAGCTCCGAACAAGAAAGCATTAG 1770 0.4446 MRVMNLESPLKTETEEAYEGEDEREDSHSLKRDLSDIDLQAHEAAVSREVRSDRSPATDKETKYSEKSGELVQSGHVSDPGIIGREDFWDSPKLTRSCSNLERRDVLGNTIHQFPDSKSQSFENLQELTAGKVAANLESPRSVMTHCSADRVMLRRHSSSQVLPSGSKRLWWKMFLWSHRNIHRPIPSKSTQVNPGVAATHNPYGYSSDTLEPKHKQSPRNVESPSPRSSNGEYFRKSYSDKNIDHQRRSRFQEESFGFWPQNQWVAFSGGSSSFNRVEEWVHDLEIQQVPPEDNFDNDNVGNIEFPPSPNAGRSMSRTVSQLSHHTDANLSKEILHANSLVQSLNPASTVAHISGVGIKAIPGISHFSSLRSVNLSNNFIVQIVPGLLPKGIHTLNLSRNKISTIEGLRDLTRLRVLDLSYNRISRIGQGLSNCTLIKELYLAGNKISDVQGLHRLLKLTVLDLSFNKITTTKALGELVANYNSLQALNLLGNPVQNNISDEQLRKSVCSLLPKLGYLNKQAIKPQRAREVLTDSVAKAALGDSSRNYNRKSPKRGNHGGPSSSNAHRSSTSVVQKSKSMPKLRTRKH 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00940 589 Gene3D Ribonuclease Inhibitor 430 530 IPR032675 -
Arst8g00940 589 MobiDBLite consensus disorder prediction 186 207 - -
Arst8g00940 589 ProSiteProfiles Leucine-rich repeat profile. 392 413 IPR001611 GO:0005515
Arst8g00940 589 MobiDBLite consensus disorder prediction 12 67 - -
Arst8g00940 589 SUPERFAMILY Outer arm dynein light chain 1 359 525 - -
Arst8g00940 589 PANTHER NISCHARIN RELATED 128 578 - -
Arst8g00940 589 MobiDBLite consensus disorder prediction 186 240 - -
Arst8g00940 589 MobiDBLite consensus disorder prediction 543 589 - -
Arst8g00940 589 SMART LRR_sd22_2 435 456 - -
Arst8g00940 589 SMART LRR_sd22_2 457 478 - -
Arst8g00940 589 SMART LRR_sd22_2 412 434 - -
Arst8g00940 589 SMART LRR_sd22_2 390 411 - -
Arst8g00940 589 FunFam Outer arm dynein light chain 1 protein 316 430 - -
Arst8g00940 589 Gene3D Ribonuclease Inhibitor 315 429 IPR032675 -
Arst8g00940 589 Pfam Leucine Rich repeat 459 471 IPR001611 GO:0005515
Arst8g00940 589 MobiDBLite consensus disorder prediction 222 237 - -
Arst8g00940 589 SMART LRR_typ_2 412 435 IPR003591 -
Arst8g00940 589 SMART LRR_typ_2 457 479 IPR003591 -
Arst8g00940 589 SMART LRR_typ_2 368 391 IPR003591 -
Arst8g00940 589 MobiDBLite consensus disorder prediction 557 580 - -
Arst8g00940 589 Pfam Leucine rich repeat 370 425 IPR001611 GO:0005515
Arst8g00940 589 ProSiteProfiles Leucine-rich repeat profile. 414 436 IPR001611 GO:0005515
Arst8g00940 589 MobiDBLite consensus disorder prediction 1 77 - -
Arst8g00940 589 ProSiteProfiles Leucine-rich repeat profile. 459 480 IPR001611 GO:0005515
Arst8g00940 589 FunFam Outer arm dynein light chain 1 protein 431 529 - -
Arst8g00940 589 ProSiteProfiles Leucine-rich repeat profile. 437 458 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00940 Arst-Chr8 12905551 12909180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00940 352 526 Receptor kinase-like Gene Family AT4G39400 31.183 2.17e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00940 - - gmx:100813969 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00940 8 12905551 12909180 Arst8g00940 8 12905551 12909180 ECH
Arst8g00940 8 12905551 12909180 Arst8g00939 8 12905551 12909180 PCT