Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00939 ATGGCCATGTGTAGGTGTGTCGATGTTGTTGATGTTTTGGTTGGGAAGAAGAAGAAGAAAGACAAGGGTGCTGAACGGTCTTCAAAGAAAGGACACGTTAACACTCTACTTGTTAAAGTAGAAGAGGCTAAGACGTCCTCGGGTTCACCAGCTTGCGATGTGAAGCCACTCACCGGAGAAGTTGTAGTTCCTTGTGATATCCCGAAGAATTCAAGGTGCAACATGAGGGTCATGAATCTTGAGAGTCCTCTAAAGACTGAGACTGAGGAAGCTTATGAAGGGGAAGACGAGCGCGAAGATTCGCATTCCCTCAAAAGGGATCTATCTGATATTGATCTCCAAGCTCATGAAGCTGCTGTGTCAAGGGAAGTAAGGTCTGATCGAAGTCCAGCAACGGATAAAGAGACGAAATACAGCGAAAAGAGCGGCGAACTAGTGCAAAGTGGGCATGTCAGTGATCCTGGGATTATTGGGAGGGAAGACTTCTGGGATTCTCCCAAGCTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATGTTCTTGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTGAAAGCCCCAGGTCTGTGATGACTCACTGCAGTGCTGATAGAGTTATGTTGAGAAGGCATTCCTCAAGCCAAGTTCTTCCTTCCGGAAGCAAGAGACTCTGGTGGAAGATGTTCCTCTGGAGCCATAGGAACATACATAGACCTATTCCAAGCAAATCAACACAGGTGAATCCTGGTGTGGCTGCAACGCACAATCCATACGGGTACTCTTCCGACACCCTTGAACCGAAGCACAAGCAATCACCAAGAAATGTGGAATCACCCTCACCAAGGTCATCAAATGGTGAATACTTTCGCAAAAGCTATAGTGATAAAAACATTGATCACCAAAGGAGGAGCAGATTCCAGGAGGAGAGTTTCGGTTTTTGGCCACAGAATCAATGGGTAGCCTTCTCAGGAGGATCATCATCCTTCAATAGAGTGGAGGAGTGGGTGCATGATCTTGAAATTCAGCAGGTGCCTCCAGAGGATAATTTTGATAATGACAATGTGGGAAACATTGAGTTCCCACCTTCTCCTAATGCTGGTAGATCAATGTCAAGAACCGTATCTCAGTTAAGTCACCATACAGATGCAAATCTTTCAAAGGAGATTCTGCATGCCAATAGTTTGGTCCAATCCCTAAATCCAGCCTCAACTGTGGCTCATATATCTGGTGTTGGTATAAAAGCGATTCCTGGTATTTCACACTTCTCCAGCCTCCGCTCTGTCAATTTGTCCAACAATTTCATAGTTCAAATTGTGCCTGGACTTCTCCCAAAGGGTATTCATACACTTAATTTGTCAAGAAATAAGATCAGCACCATTGAGGGGCTTAGAGATTTAACCCGGTTACGAGTACTTGACTTGAGTTACAATCGCATCTCAAGAATTGGACAAGGTTTATCAAATTGCACACTTATCAAAGAGCTATATCTTGCTGGGAATAAGATAAGTGATGTTCAGGGACTACACAGATTACTGAAGCTAACAGTTCTGGATTTGAGCTTCAACAAGATCACAACAACAAAAGCATTAGGGGAACTTGTAGCTAACTACAACTCACTTCAGGCCTTGAATCTGCTTGGAAATCCAGTTCAAAACAACATCAGTGACGAGCAGTTGCGGAAATCAGTTTGCAGTCTTCTTCCGAAGCTTGGATACCTGAACAAGCAAGCCATCAAGCCTCAGAGGGCACGAGAAGTACTCACTGACAGTGTTGCCAAAGCTGCACTTGGTGACAGCAGCCGGAACTACAACCGAAAATCACCGAAGAGAGGCAACCATGGAGGTCCCAGTTCCTCAAATGCGCATAGAAGCAGTACTAGTGTTGTCCAGAAAAGTAAGAGCATGCCAAAGCTCCGAACAAGAAAGCATTAG 1992 0.4463 MAMCRCVDVVDVLVGKKKKKDKGAERSSKKGHVNTLLVKVEEAKTSSGSPACDVKPLTGEVVVPCDIPKNSRCNMRVMNLESPLKTETEEAYEGEDEREDSHSLKRDLSDIDLQAHEAAVSREVRSDRSPATDKETKYSEKSGELVQSGHVSDPGIIGREDFWDSPKLTRSCSNLERRDVLGNTIHQFPDSKSQSFENLQELTAGKVAANLESPRSVMTHCSADRVMLRRHSSSQVLPSGSKRLWWKMFLWSHRNIHRPIPSKSTQVNPGVAATHNPYGYSSDTLEPKHKQSPRNVESPSPRSSNGEYFRKSYSDKNIDHQRRSRFQEESFGFWPQNQWVAFSGGSSSFNRVEEWVHDLEIQQVPPEDNFDNDNVGNIEFPPSPNAGRSMSRTVSQLSHHTDANLSKEILHANSLVQSLNPASTVAHISGVGIKAIPGISHFSSLRSVNLSNNFIVQIVPGLLPKGIHTLNLSRNKISTIEGLRDLTRLRVLDLSYNRISRIGQGLSNCTLIKELYLAGNKISDVQGLHRLLKLTVLDLSFNKITTTKALGELVANYNSLQALNLLGNPVQNNISDEQLRKSVCSLLPKLGYLNKQAIKPQRAREVLTDSVAKAALGDSSRNYNRKSPKRGNHGGPSSSNAHRSSTSVVQKSKSMPKLRTRKH 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00939 663 SUPERFAMILY Outer arm dynein light chain 1 433 599 - -
Arst8g00939 663 MobiDBLite consensus disorder prediction 631 654 - -
Arst8g00939 663 FunFam Outer arm dynein light chain 1 protein 505 603 - -
Arst8g00939 663 ProSiteProfiles Leucine-rich repeat profile. 533 554 IPR001611 GO:0005515
Arst8g00939 663 MobiDBLite consensus disorder prediction 296 311 - -
Arst8g00939 663 FunFam Outer arm dynein light chain 1 protein 390 504 - -
Arst8g00939 663 Pfam Leucine rich repeat 444 499 IPR001611 GO:0005515
Arst8g00939 663 SMART LRR_sd22_2 531 552 - -
Arst8g00939 663 SMART LRR_sd22_2 486 508 - -
Arst8g00939 663 SMART LRR_sd22_2 464 485 - -
Arst8g00939 663 SMART LRR_sd22_2 509 530 - -
Arst8g00939 663 Gene3D Ribonuclease Inhibitor 507 604 IPR032675 -
Arst8g00939 663 MobiDBLite consensus disorder prediction 84 104 - -
Arst8g00939 663 ProSiteProfiles Leucine-rich repeat profile. 488 510 IPR001611 GO:0005515
Arst8g00939 663 PANTHER NISCHARIN RELATED 202 651 - -
Arst8g00939 663 MobiDBLite consensus disorder prediction 260 281 - -
Arst8g00939 663 Gene3D Ribonuclease Inhibitor 385 506 IPR032675 -
Arst8g00939 663 MobiDBLite consensus disorder prediction 86 104 - -
Arst8g00939 663 ProSiteProfiles Leucine-rich repeat profile. 511 532 IPR001611 GO:0005515
Arst8g00939 663 SMART LRR_typ_2 486 509 IPR003591 -
Arst8g00939 663 SMART LRR_typ_2 442 465 IPR003591 -
Arst8g00939 663 SMART LRR_typ_2 531 553 IPR003591 -
Arst8g00939 663 MobiDBLite consensus disorder prediction 118 151 - -
Arst8g00939 663 ProSiteProfiles Leucine-rich repeat profile. 466 487 IPR001611 GO:0005515
Arst8g00939 663 MobiDBLite consensus disorder prediction 617 663 - -
Arst8g00939 663 MobiDBLite consensus disorder prediction 118 141 - -
Arst8g00939 663 MobiDBLite consensus disorder prediction 260 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00939 Arst-Chr8 12905551 12909180 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00939 426 600 Receptor kinase-like Gene Family AT4G39400 31.183 3.86e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00939 - - gmx:100810094 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00939 8 12905551 12909180 Arst8g00939 8 12905551 12909180 ECH
Arst8g00940 8 12905551 12909180 Arst8g00939 8 12905551 12909180 PCT