Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02296 ATGGATAATATGGCGTCTTCAAGATCCAACAAGAAGAGAAAGAGCTCCGTCAACATTCTAGATGTTCGTCAGGCTTCGGAGCTGCATGCCGTTGAATCCTTTCGCCAAGTTTTGATTATTCACCAATTGCTTCCTCAAAAATATGATGATTACCACATCATGCTAAGATTTCTAAAGGCAAGGAAGTTTGATATTGAAAAGGCAAAGAAGATGTGGAGGGATATGGTGGAATGGAGAAGGGAGTTTGGAGCTGATAGCATCATGGAGGATTTTGAATTCAAAGAGTTAAATGAAGTAGTGAAGTATTATCCACACGGCCATCACGGTGTTAATAAGGAGGGAAGACCTGTTTACATTGAAAGACTCGGAAATGTTGATCCAAACAAACTCATGCAAGTCACAACTCTCGATAGATATCTCAGGTATCACGTTTACGAGTTTGAGAAAGCTTTTGCAATCAAGTTTCCTGCTTGCTCCATTGCTGCTAACACCCACATAGATTCAAGCACTGCCATCTTGGATGTTCACGGCCTCGGCCTTAAGAATCTTACCAAGCCTGCACGAGACCTCATTACACGATTGCTCAAGATTGATGCTGATTATTATCCTGAGGTTCTTGGAAACAAGTACAAGAGCAAATTACTTGAAGTAATTGATGCCAGCGAATTGCCAGAATTTCTAGGGGGAACCTGCAGTTGTGTTGAGCATGGAGGTTGCCTTAAATCAGATAAAGGCCCTTGGAGAAACCCTGATATATTGAAGATGATTTTCAATGGAGAAGCACAATTGGCAAGACAAGTAGTCAAGGTTATAAATAGTGAAGATAAAGTCATTACATATGCCAAAGCCAAAACTCGACCTCCATTGCATGTAAAAGGCAACGATACAACCATAGTTGAATCAAGCTCAGAGGATGAAGATATAACTTGTCCAAATGCCATGAATAACTGCTACTCGAACCTTAGTTTGAAACCTGTTCATGAAGAAGCTAAGGTAGCTGGAACGTCAAGCCATCGAATAAATAACTTGTCTGGGTATGATGAATGCATTATTCCAATGGTGGACAAACTTGTGGATGCAGTTTCGAAGAATCCATCTCAACAAAGTTCTTATACTTTAAAAGGTAGAGGTACAGATGGAGCTCCAGAAAGGAATGAAGCTCAGATTTGGATAGAGCTAATAACTGTGTTGTTGTTTACTCTATTTACTTGCTTCCGTTCAATTGCACTCCGTTTGAACAAGAGACTTCCTCATATATCATCATCTAATAATGTTGATCATAGTGGTTTAGAGTCCACTCTTGATGCAACAAACAAGGAGCTTCCTATTACACCATCAAGTTCCACAGATACAAAGGAAAATGTTCTTCCTTCCATGTTGGAGAGGACATGTGAGCTTGAAGACAAGGTTGAGATGCCTCGTGACAGAGAAGAATCTTTAAATGCTGCTGTCTCCAACGTGGATACATTGGAAGCAGAGTTAAGTGCTACTAAAAAGGCTCTGGATGAAGCGTTAATGAGGCAACAAGAGTTGCTTGATTACATTGATCGTCAAGTTGAAGCCAAGTTTCAGAAAAAGAAGTTTTGTTGGTGCTGA 1596 0.4029 MDNMASSRSNKKRKSSVNILDVRQASELHAVESFRQVLIIHQLLPQKYDDYHIMLRFLKARKFDIEKAKKMWRDMVEWRREFGADSIMEDFEFKELNEVVKYYPHGHHGVNKEGRPVYIERLGNVDPNKLMQVTTLDRYLRYHVYEFEKAFAIKFPACSIAANTHIDSSTAILDVHGLGLKNLTKPARDLITRLLKIDADYYPEVLGNKYKSKLLEVIDASELPEFLGGTCSCVEHGGCLKSDKGPWRNPDILKMIFNGEAQLARQVVKVINSEDKVITYAKAKTRPPLHVKGNDTTIVESSSEDEDITCPNAMNNCYSNLSLKPVHEEAKVAGTSSHRINNLSGYDECIIPMVDKLVDAVSKNPSQQSSYTLKGRGTDGAPERNEAQIWIELITVLLFTLFTCFRSIALRLNKRLPHISSSNNVDHSGLESTLDATNKELPITPSSSTDTKENVLPSMLERTCELEDKVEMPRDREESLNAAVSNVDTLEAELSATKKALDEALMRQQELLDYIDRQVEAKFQKKKFCWC 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02296 531 Gene3D - 1 82 - -
Arst7g02296 531 SMART CRAL_TRIO_N_2 50 75 IPR011074 -
Arst7g02296 531 CDD SEC14 93 230 IPR001251 -
Arst7g02296 531 SMART sec14_4 95 232 IPR001251 -
Arst7g02296 531 SUPERFAMILY CRAL/TRIO N-terminal domain 25 91 IPR036273 -
Arst7g02296 531 Gene3D - 208 259 IPR036865 -
Arst7g02296 531 Gene3D - 83 207 IPR036865 -
Arst7g02296 531 Pfam CRAL/TRIO, N-terminal domain 51 74 IPR011074 -
Arst7g02296 531 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 9 206 - -
Arst7g02296 531 SUPERFAMILY CRAL/TRIO domain 95 254 IPR036865 -
Arst7g02296 531 Coils Coil 480 507 - -
Arst7g02296 531 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 95 299 IPR001251 -
Arst7g02296 531 Pfam CRAL/TRIO domain 102 208 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02296 Arst-Chr7 53794187 53798437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02296 40 204 Acyl Lipid Metabolism Gene Families AT1G55840 30.409 1.15e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02296 K26544 - ahf:112767041 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02296 7 53794187 53798437 Arst7g02296 7 53794187 53798437 ECH
Arst7g02296 7 53794187 53798437 Arst1g00143 1 1238145 1244273 ECH