Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g02092 ATGGGAAAGAAAGAAAAAGCAAAGGAGAGAAGAGAAAAGAGGCTACAAGAGATACAACATCTGATGACTGTTCCCTACTCCGATGACCAGAGGTGGTGGTCCAAGGAAACTGTGGCAGTGGTTACTGGTGGAAACAGAGGGATCGGGTTAGAGATTTGCAGGCAACTTGCCGCTCATGGAGTGACTGTTATACTGACTTCTAGAGATCCCGGTGCTGGGCTTGAGTCAATAAAATTTTTGAGTGAAGTTGGCCTTAGCCTGATTTATCATCAACTTGACATTCTAGATTTGTCATCAATCAACCGGTTTATTGAGTGGTTGAAGGAAAATTATGGTGGTTTGGATATTCTGGTGAACAATGCTGGCATTAATTTCAATCTTGGGTCTGATAACTCAGTTGAAAATGCCCGTAAGGTTGTTGAAACAAATTATTATGGCACCAAGAGTATGATTGAAGCCATGATTCCACTGATGAAACCTTCTGTCGTCGGTGCTCGTATCGTAAATGTTAGCTCTCGTCTAGGGCGCCTAAATGGAAGACGCAATAGGATCAGCAACGCAGCTTTGAGGGAACAACTGAGTGATGTGGAGTCTCTTTCGGAGGAACTAATCAACACGGCTCTATCCACATTTCTCCGACAAGTCGATGATGGAACTTGGGCATCTGGTGGGTGGCCTCAAGTGTATACTGACTACTCTCTGTCAAAACTCGCAGTCAATGCATATACAAGGCTTATGGCGAGGAAACTTTCTGATCGCCAGGAACATGAAAAGATTTTTGTTAACTGCTATTGCCCAGGTTGGGTGAAGACTGCTCTTACTGGCTATGCCGGCAATAATACCGTCGAGGAAGGAGCTGATACTGGTGTGTGGCTAGCCCTTCTTTCCCACCAACCAATTACTGGGAAATTTTTCGCTGAGAGACGAGAAATCAACTTTTAA 942 0.4437 MGKKEKAKERREKRLQEIQHLMTVPYSDDQRWWSKETVAVVTGGNRGIGLEICRQLAAHGVTVILTSRDPGAGLESIKFLSEVGLSLIYHQLDILDLSSINRFIEWLKENYGGLDILVNNAGINFNLGSDNSVENARKVVETNYYGTKSMIEAMIPLMKPSVVGARIVNVSSRLGRLNGRRNRISNAALREQLSDVESLSEELINTALSTFLRQVDDGTWASGGWPQVYTDYSLSKLAVNAYTRLMARKLSDRQEHEKIFVNCYCPGWVKTALTGYAGNNTVEEGADTGVWLALLSHQPITGKFFAERREINF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g02092 313 Coils Coil 186 206 - -
Arst7g02092 313 CDD carb_red_PTCR-like_SDR_c 38 313 IPR045313 GO:0016616
Arst7g02092 313 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Arst7g02092 313 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 232 251 IPR002347 -
Arst7g02092 313 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 173 IPR002347 -
Arst7g02092 313 PRINTS Glucose/ribitol dehydrogenase family signature 38 55 IPR002347 -
Arst7g02092 313 PRINTS Glucose/ribitol dehydrogenase family signature 232 251 IPR002347 -
Arst7g02092 313 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Arst7g02092 313 PRINTS Glucose/ribitol dehydrogenase family signature 257 274 IPR002347 -
Arst7g02092 313 FunFam (+)-neomenthol dehydrogenase 31 313 - -
Arst7g02092 313 Gene3D - 30 313 - -
Arst7g02092 313 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 38 310 - -
Arst7g02092 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 305 IPR036291 -
Arst7g02092 313 Pfam short chain dehydrogenase 38 177 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g02092 Arst-Chr7 44790926 44796903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g02092 35 172 Acyl Lipid Metabolism Gene Families AT1G63380 33.333 3.48e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g02092 K00079 - gmx:100790340 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02092 7 44790926 44796903 Arst7g02092 7 44790926 44796903 ECH
Arst7g02092 7 44790926 44796903 Arst2g00707 2 7484234 7488159 PCT
Arst2g00708 2 7491324 7493962 Arst7g02092 7 44790926 44796903 PCT