Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00708 ATGGAACAAGCGCCACAGAGATATGCAGTTGTGACGGGAGCAAATAAAGGAATTGGAATAGAAATAGTAAGGCAATTAGCTTCAAATGGAGTGAAGGTTGTGTTGACTTCAAGAGATGAGAAGAGAGGCCTTCATGCATTGGAAACTCTCAAAGATCTCTCTCATCTTGTGCTCTTTCACCACCTTGATGTTGCTGATCCTGCTAGTGTGGATTCTCTTGCAAATTTCATCAAATCCGAATTTGGAAAACTCCACATTTTGATCAACAATGCAGGGATTGGTGGACTTGTGATTAAGGACAATGATTTGGTCCCTCAAGTGTTATTCAAAAGCAGGTGTGTATCAAATGAATGGGCTAAAGGAATCTTGGGTGATGCTGAAAACCTTACAGAAGAGAGAGTTGATGAAGTGTTGAATGAATTTCTGAAAGATATCAAAGAAGGGTGTTTGGAAAGAAAAGGATGGCCTAAGGTTCTTGGTGCCTATATTATCTCAAAAGCTGCAATGAATGCATATACAAGAATTGTTGCTAAAAAGTACCCTACTATATGCATCAACAGTGTGTGTCCTGGTTATGTTAAAACTGATATAACTGCCAATACTGGATTTTTAACGGCAGAAGAAGGTGCTGCTACTGTTGTCAAAATAGCATTGCTTTCAAATGCCTCTTCTGGCCTTTTCTATTCTCAGAATGAAGTTTCTTCATTCTAA 711 0.3882 MEQAPQRYAVVTGANKGIGIEIVRQLASNGVKVVLTSRDEKRGLHALETLKDLSHLVLFHHLDVADPASVDSLANFIKSEFGKLHILINNAGIGGLVIKDNDLVPQVLFKSRCVSNEWAKGILGDAENLTEERVDEVLNEFLKDIKEGCLERKGWPKVLGAYIISKAAMNAYTRIVAKKYPTICINSVCPGYVKTDITANTGFLTAEEGAATVVKIALLSNASSGLFYSQNEVSSF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00708 236 Gene3D - 2 236 - -
Arst2g00708 236 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 IPR002347 -
Arst2g00708 236 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Arst2g00708 236 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 220 IPR036291 -
Arst2g00708 236 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Arst2g00708 236 PRINTS Glucose/ribitol dehydrogenase family signature 181 198 IPR002347 -
Arst2g00708 236 PRINTS Glucose/ribitol dehydrogenase family signature 162 181 IPR002347 -
Arst2g00708 236 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Arst2g00708 236 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 113 234 - -
Arst2g00708 236 Pfam short chain dehydrogenase 8 95 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00708 Arst-Chr2 7491324 7493962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00708 9 236 Miscellaneous Gene Families AT2G29150 29.536 1.56e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00708 K15095 - qsu:111997902 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00708 2 7491324 7493962 Arst2g00708 2 7491324 7493962 ECH
Arst7g02091 7 44790925 44796903 Arst2g00708 2 7491324 7493962 PCT
Arst2g00708 2 7491324 7493962 Arst7g02092 7 44790926 44796903 PCT