Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01902 ATGGCTTCATCAGGAACTAGTTTGGGATCTAGCTCTTGGAGAAAACCGAAACACCAACAACACTTCCAAGTGTGCTTCTGTTTCAAGAGGATATTCAAGCTTAAGGTGTCGGAACCGCCAGAGGAAATCCGAAGTATCTTCGAGAAGTTCTCGGAAAACAACAATGGCACGGTGATGAGTGTTGATGGGCTCTACAGATTCTTGGTTCGGTTCCAAGGAGAAAGAGATTGTGATGATACAAAACACAAGGCTCAAGCTATATTTGATAGTCACAAGCATCTCTTCTTGTTCCAAAGGAAAGGCTTTCATCTTGATGCATTCTTTCGCTATCTCTTAGGTGATGATAATGCCCCTCTTCTTCAGGTTGGTCATGACATGAGAAGCCCACTGGCCCATTATTTCTTATACACGGGCCATAACTCCTACTTAACAGGTAATCAATTTAGTAGTAATAGCAGCACCGCCCCAATTATAAAGGCACTCAAGAAAGGTGTTAGAGTCATCGAACTTGATTTGTGGCCTAACTCCACTGGTAATTCTGTTGAAGTTCGTCATGGAAGGACTCTAACTAGTCCGGTGAAACTGAGAGCTTGTTTGAAAGCAATTAAAGAATATGCATTTTATGCTTCTAAGTATCCTGTTGTTATAACTTTTGAAGACCATATAACTCCACCTCTCCAAGCTAAAGTTGCCAAGATGGTGAATGGCATATTTGGGGACATGCTGTATCGCCCTTCTTCACAACACATTATGAATAAGTTCCCATCTCCAGAATCACTGAAGGAAAAGATTCTAATTTCAACCAAACCACCAGAAACTCCTGAAGAAGATCAAGAGCACAACGAAGAAAGATCATCTGAAGTCAACTATATGATGCGATATAATTCATATGACAAGGATAAAAATGGAGATGAAGATGAAGAGAAAGAGGATAATTCTCTAGAATACAGAGATTTAATCTCAATTCATGCGGGGAAACCAAAAGGTGGGTCAGGGAATTTGTTCATTAGTCATGAAAAAGTAAGGCGTCTAAGCTTGAGCGAGGACCAGCTTGAGGAAATTGCTAAAACAAGGGCAACAGAAATTGTCAGATTCACCCAAAAGAATCTGCTTAGAATATATCCAAGGGGCACGCGTGTGGACTCATCTAATTACAACCCCATGGTTGGATGGATGCATGGAGCTCAGATGGTAGCCTTTAATATGCAGGGACATGGGCACTTGCTTAGGATGATGGAAGGAATGTTCAGAGCAAATGGTGGGTGTGGCTATGTCAAGAAACCAAATATCTTGTTGGATGAGAACGAGGTCTTTGATCCTAGTGCATTTAGACTACCTAAAAAAAATCTGCAGGTTATGGTGTACATGGGTGAAGGTTGGCGTTCAGAATTTTCCCCAACACACTTTGATTTATATTCTCCTCCTGACTTCAGTGTAGAGCTTCGTATCTATGGTGTCCCAGCAGATGAAAGTATAAAAGAAACAATGACAATGGAAGATGAGTGGGTACCTGTATGGAACCAAGAATTTATCTTCCCATTAACGGTTCCGGAATTGGCACTCTTATACATCAAAGTGGTCGAACATGACTTCAAAGGAAAGAATGATTTTGGAGGACAAACATGTTTGCCTGTTTCTGAGTTAAGACAAGGCATTCGTTCGATTCGTTTGTGTAACCAAAAAGGTGAACCTTATAAGCATGTAAGGCTTCTTATGCAATTCCAATTTATATAA 1734 0.4066 MASSGTSLGSSSWRKPKHQQHFQVCFCFKRIFKLKVSEPPEEIRSIFEKFSENNNGTVMSVDGLYRFLVRFQGERDCDDTKHKAQAIFDSHKHLFLFQRKGFHLDAFFRYLLGDDNAPLLQVGHDMRSPLAHYFLYTGHNSYLTGNQFSSNSSTAPIIKALKKGVRVIELDLWPNSTGNSVEVRHGRTLTSPVKLRACLKAIKEYAFYASKYPVVITFEDHITPPLQAKVAKMVNGIFGDMLYRPSSQHIMNKFPSPESLKEKILISTKPPETPEEDQEHNEERSSEVNYMMRYNSYDKDKNGDEDEEKEDNSLEYRDLISIHAGKPKGGSGNLFISHEKVRRLSLSEDQLEEIAKTRATEIVRFTQKNLLRIYPRGTRVDSSNYNPMVGWMHGAQMVAFNMQGHGHLLRMMEGMFRANGGCGYVKKPNILLDENEVFDPSAFRLPKKNLQVMVYMGEGWRSEFSPTHFDLYSPPDFSVELRIYGVPADESIKETMTMEDEWVPVWNQEFIFPLTVPELALLYIKVVEHDFKGKNDFGGQTCLPVSELRQGIRSIRLCNQKGEPYKHVRLLMQFQFI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01902 577 Gene3D Phosphatidylinositol (PI) phosphodiesterase 122 442 IPR017946 GO:0006629|GO:0008081
Arst7g01902 577 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 345 431 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst7g01902 577 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 124 269 - -
Arst7g01902 577 SMART plcy_3 316 432 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst7g01902 577 SUPERFAMILY EF-hand 28 120 IPR011992 -
Arst7g01902 577 Pfam Phosphatidylinositol-specific phospholipase C, X domain 126 269 IPR000909 -
Arst7g01902 577 PRINTS Phospholipase C signature 370 391 IPR001192 GO:0035556
Arst7g01902 577 PRINTS Phospholipase C signature 129 147 IPR001192 GO:0035556
Arst7g01902 577 PRINTS Phospholipase C signature 253 270 IPR001192 GO:0035556
Arst7g01902 577 PRINTS Phospholipase C signature 155 175 IPR001192 GO:0035556
Arst7g01902 577 PRINTS Phospholipase C signature 391 409 IPR001192 GO:0035556
Arst7g01902 577 PRINTS Phospholipase C signature 543 553 IPR001192 GO:0035556
Arst7g01902 577 MobiDBLite consensus disorder prediction 269 290 - -
Arst7g01902 577 Pfam C2 domain 450 551 IPR000008 -
Arst7g01902 577 SUPERFAMILY PLC-like phosphodiesterases 124 433 IPR017946 GO:0006629|GO:0008081
Arst7g01902 577 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 450 576 IPR035892 -
Arst7g01902 577 FunFam Phosphoinositide phospholipase C 121 442 - -
Arst7g01902 577 SMART C2_3c 449 557 IPR000008 -
Arst7g01902 577 MobiDBLite consensus disorder prediction 269 287 - -
Arst7g01902 577 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 20 576 IPR001192 GO:0035556
Arst7g01902 577 Gene3D - 38 121 - -
Arst7g01902 577 Gene3D C2 domain 444 577 IPR035892 -
Arst7g01902 577 ProSiteProfiles C2 domain profile. 424 559 IPR000008 -
Arst7g01902 577 FunFam Phosphoinositide phospholipase C 445 577 - -
Arst7g01902 577 CDD C2_PLC_like 447 576 - -
Arst7g01902 577 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 344 429 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst7g01902 577 SMART plcx_3 124 269 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01902 Arst-Chr7 29750228 29754702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g01902 19 577 Acyl Lipid Metabolism Gene Families AT3G55940 52.462 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01902 K05857 - gmx:100817915 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01902 7 29750228 29754702 Arst7g01902 7 29750228 29754702 ECH
Arst7g01902 7 29750228 29754702 Arst10g01401 10 22965092 22970044 ECH
Arst7g01902 7 29750228 29754702 Arst7g01135 7 9818776 9822850 ECH