Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01401 ATGTCCAAACAGACTTACAGAGTTTGCTTCTGCTGCCGCCGGCGATTCAAGCTCGCCGTGTCGGAGGCGCCGCCGGAGATAAGGAATCTCTTCGACCGGTACTCCGAGAACGGGCTCATGACGGCGTCGCATCTGCGGAGCTTCATGGTTGAAGTGCAGAGAGAGGAGACAGCGACGGAGGAGGAAGCGCAGGGAATCATTGATGGACTCAAGCATCTCAGTATCTTCCATAGAAGAGGTCTCAATCTCGAAAGTTTCTTTAAGTTCCTCTTCAGTGATAACAATCCACCACTTGCACAACCAATGGTGCACCATGATATGAATGCACCATTGTCTCATTATTATATATTTACCGGTCACAATTCCTATCTGACGGGAAATCAGCTTAGTAGTGACTGCAGTGATGTCCCCATCATACGTGCACTGCAGAGAGGTGTTAGGGTCATTGAATTGGATATATGGCCCAATGCATCAAAGGATGATGTGGATGTTCTTCATGGAAGGACATTGACTACTCCCGTGGCACTCATCAAATGTTTGAGGTCTATTAAGGAGCATGCTTTTGTTGCATCAGAATATCCAGTTGTAATAACCTTAGAAGACCATCTTACTCCTGATCTTCAAGCCAAAGTGGCTGAGATGATTACTCAAACTTTTGGAGACATACTATTTTGTCCTACCCCAGAAAGTGTGAAGGAATTCCCTTCTCCAGAATCACTTAAAAGAAGGGTCATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGACATAAAGGAAAAGGAGGATGAATCACATCAGGGAAAGGCTTTGGGTGACGAAGAAGCATGGGGGAAGGAAGTCCCAAGTCTTAAAGGCGGTACTATTGCTGATTACAAGCAGAACAATGGGAATGATGATGATGATGATGATGATGATGATGATGACAATGACGATGATGATGAGGAAGATGCTGATGAAGAAAAGTCTCGTCAAGATGTATGTGCTGAATATCGACGTTTGATCGCTATTCATGCTGGAAAGCCCAAAGGAGGATTACTTGAAGGTCTTAGAGTGGATCCTGATAAAGTGAGGCGATTAAGTCTAAGCGAGCAGCAGCTTGAAAATGCTGCTTTATCTCATGGAAAAGAAATTGTCAGGTTTACTCAGCGGAATATACTGAGGGTGTATCCAAAAGGCACTCGCATTACCTCGTCGAATTATAACCCATTAATTGGGTGGATGCACGGAGCGCAAATGGTTGCATTTAACATGCAGGGCTATGGCAGGTCTCTGTGGTTGATGCAGGGAATGTTCAAAGCTAATGGAGGATGTGGTTATGTTAAAAAACCAGATTTTCTATTAAAGACTGGTCCAAATAATGAGGTCTTTGATCCAAAGGCTAAGTTGCCTGTGAAGACTACTTTGAGGGTAACTGTATATATGGGGGAAGGATGGTACTACGATTTCAAGCATACACACTTCGATCAATACTCACCTCCAGATTTCTATGCAAGAGTGGGGATTGCTGGAGTCCCTGATGACACTCTGATGAGGAAAACCAAGACAAAAGAGGACAATTGGTTGCCAACTTGGAACGAGGTATTCGAGTTCCCACTATCTGTTCCAGAACTGGCTTTGCTTCGTGTAGAAGTTCACGAGTATGATATGTCTGAGAAGGATGACTTTGGTGGACAGACATGCTTGCCTGTGTGTGAACTTCAGACCGGAATTCGAGCAGTTCCACTGCATAACCGCAAGGGAGAGAAGTACAACAATGTGAAGCTTCTCATGCGCTTTGAGTTCATCTGA 1797 0.4446 MSKQTYRVCFCCRRRFKLAVSEAPPEIRNLFDRYSENGLMTASHLRSFMVEVQREETATEEEAQGIIDGLKHLSIFHRRGLNLESFFKFLFSDNNPPLAQPMVHHDMNAPLSHYYIFTGHNSYLTGNQLSSDCSDVPIIRALQRGVRVIELDIWPNASKDDVDVLHGRTLTTPVALIKCLRSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMITQTFGDILFCPTPESVKEFPSPESLKRRVIISTKPPKEYLEAKDIKEKEDESHQGKALGDEEAWGKEVPSLKGGTIADYKQNNGNDDDDDDDDDDDNDDDDEEDADEEKSRQDVCAEYRRLIAIHAGKPKGGLLEGLRVDPDKVRRLSLSEQQLENAALSHGKEIVRFTQRNILRVYPKGTRITSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGYVKKPDFLLKTGPNNEVFDPKAKLPVKTTLRVTVYMGEGWYYDFKHTHFDQYSPPDFYARVGIAGVPDDTLMRKTKTKEDNWLPTWNEVFEFPLSVPELALLRVEVHEYDMSEKDDFGGQTCLPVCELQTGIRAVPLHNRKGEKYNNVKLLMRFEFI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01401 598 Gene3D Phosphatidylinositol (PI) phosphodiesterase 101 463 IPR017946 GO:0006629|GO:0008081
Arst10g01401 598 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 597 IPR035892 -
Arst10g01401 598 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Arst10g01401 598 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Arst10g01401 598 PRINTS Phospholipase C signature 564 574 IPR001192 GO:0035556
Arst10g01401 598 PRINTS Phospholipase C signature 388 409 IPR001192 GO:0035556
Arst10g01401 598 PRINTS Phospholipase C signature 409 427 IPR001192 GO:0035556
Arst10g01401 598 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Arst10g01401 598 MobiDBLite consensus disorder prediction 255 282 - -
Arst10g01401 598 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 363 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01401 598 ProSiteProfiles C2 domain profile. 451 580 IPR000008 -
Arst10g01401 598 SUPERFAMILY EF-hand 24 99 IPR011992 -
Arst10g01401 598 SUPERFAMILY PLC-like phosphodiesterases 105 451 IPR017946 GO:0006629|GO:0008081
Arst10g01401 598 Gene3D C2 domain 465 598 IPR035892 -
Arst10g01401 598 FunFam Phosphoinositide phospholipase C 465 598 - -
Arst10g01401 598 MobiDBLite consensus disorder prediction 299 323 - -
Arst10g01401 598 SMART plcy_3 333 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01401 598 SMART C2_3c 470 578 IPR000008 -
Arst10g01401 598 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Arst10g01401 598 Pfam C2 domain 471 572 IPR000008 -
Arst10g01401 598 CDD PI-PLCc_plant 104 437 - -
Arst10g01401 598 CDD C2_PLC_like 468 597 - -
Arst10g01401 598 Gene3D - 22 100 - -
Arst10g01401 598 MobiDBLite consensus disorder prediction 255 327 - -
Arst10g01401 598 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Arst10g01401 598 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 362 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01401 598 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 11 597 IPR001192 GO:0035556
Arst10g01401 598 SMART plcx_3 105 249 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01401 Arst-Chr10 22965092 22970044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01401 1 598 Acyl Lipid Metabolism Gene Families AT3G55940 67.112 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01401 K05857 - gmx:100784534 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01401 10 22965092 22970044 Arst7g01135 7 9818776 9822850 ECH
Arst7g01902 7 29750228 29754702 Arst10g01401 10 22965092 22970044 ECH
Arst10g01401 10 22965092 22970044 Arst10g01401 10 22965092 22970044 ECH
Arst10g01401 10 22965092 22970044 Arst7g01135 7 9818776 9822850 PCT