Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01200 ATGGCGTCGATGGAGGAAGACGGCGGCGGCGGCGGCGGCGGAGGGAGCAACAAGAAGAGGATGGAGGCGATGATAAGTACGAGGCTGTCGGACGTGGTGTTGGACATAGTGATGCCGTACATCCACGACCCGAAGGACCGCGACGCCGTGTCGCAGGTGTGCCGGCGGTGGTACGAGCTGGACTCACTGACTCGGAAGCACGTGACCATCGCGCTCTGCTACACCACGTCACCGGACAGGCTCCGCCGCCGCTTCCCCCACTTGGAGTCCCTGAAGCTCAAAGGAAAGCCACGCGCCGCCATGTTCAACCTCATACCTGAGGATTGGGGCGGTTTCGTTACTCCTTGGGTTAAAGAGATCTCTCACTACTTCGATTGCCTTAAGAGCCTTCACTTTCGACGAATGATCGTTAGGGATATGGATCTTGAGCTTCTTGCTCGTTCCAGAGGCCATGTTCTTCAAGCTCTTAAGCTTGATAAGTGTTCTGGCTTCTCCACTGATGGACTCTACTATATTGGCAGATTTTGCAGGAATTTGAGAATCTTGTTTTTGGAGGAAAGCGCGGTGGTTGAGAACGATGGTGAATGGCTCCATCAGCTTGCTCTAAACAACACAGTTCTTGAGTCCCTCAATTATTACTTGACGGATATTAACAACCATGTTAGGATTCAGGACCTTGAGCTCATAGCCAGAAACTGTCCCAACTTAGCCTCTGTGAAGATTACTGATTCTGAAATCATGGACCTTGTCAACTTCTTCAGATATGCATCGTCACTCGAAGAATTCTCAGGGGGCACCTACAATGAGCCACCGGAGAGGTACAATGCCGTGGTGTTGCCAGCAAGGTTAAGCCGATTGGGTTTGACATACATTGGAAGTGATGAATTGCCGATTGTGTTCCCTTACGCCACACTACTCAAGAAATTGGACCTTCTATATGCATTGCTGGACACAGAGGATCACTGTAATTTAATTCAAAGGTGCCCCAACTTGGAAGTCTTAGAGTCAAGGAATGTAATTGGGGACAGAGGATTAGAAGTACTTGCCAGCAGTTGCAAGAAGCTAAAAAGGCTAAGAATCGAAAGAGGTGACGATGATCAAGGAATGGCTGAAGAAGCAGGTGTAGTTTCCCAGAGAGGACTAACTGCTCTGTCACAAGGCTGCCCTGAACTTGAATACATGGCCGTTTATGTATCCGACATCACAAACGCGTGTTTGGAACACATAGGCACCCACCTCAGAAACCTCTGCGATTTTCGCCTCGTCTTGCTCGACCGAGAGGAGAAGATCACTGATTTGCCCCTTGACAATGGGGTGAGGGCACTGCTAAGAGGTTGCAACAGACTGAGAAGATTCGCATTGTACCTTAGACCAGGTGGCCTCACTGACGTGGGGCTCGGTTACATTGGGCAATATAGCCCGAATGTTAGATGGATGTTACTCGGCTACGTTGGTGAAACCGATAGAGGACTCTTGGAGTTCTCAAAGGGTTGTCCAAGCCTTCAGAAGCTTGAGATGAGAGGGTGTTCATTTTTCAGTGAGTATGCATTGGCTGTTGCAGCGACACGGTTGACTTCTCTGAGGTACCTTTGGGTGCAAGGCTATGGAGCGTCTCGTTCGGGGCGTGATCTTCTGGCAATGGCTAGACCATTTTGGAACATCGAGTTGATCCCTTCGAGGCGTGTGGCCATGAATGACAATGCTGAGGTCGAGCATCCAGCTCACATTCTTGCATACTACTCCCTTGCCGGACCGAGAAAAGATTTTCCAGATACTGTTATACCTTTGGATCCAGCAGCATATGTTAAAGATGAAGACAATTAG 1824 0.4962 MASMEEDGGGGGGGGSNKKRMEAMISTRLSDVVLDIVMPYIHDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTSPDRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGFVTPWVKEISHYFDCLKSLHFRRMIVRDMDLELLARSRGHVLQALKLDKCSGFSTDGLYYIGRFCRNLRILFLEESAVVENDGEWLHQLALNNTVLESLNYYLTDINNHVRIQDLELIARNCPNLASVKITDSEIMDLVNFFRYASSLEEFSGGTYNEPPERYNAVVLPARLSRLGLTYIGSDELPIVFPYATLLKKLDLLYALLDTEDHCNLIQRCPNLEVLESRNVIGDRGLEVLASSCKKLKRLRIERGDDDQGMAEEAGVVSQRGLTALSQGCPELEYMAVYVSDITNACLEHIGTHLRNLCDFRLVLLDREEKITDLPLDNGVRALLRGCNRLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDRGLLEFSKGCPSLQKLEMRGCSFFSEYALAVAATRLTSLRYLWVQGYGASRSGRDLLAMARPFWNIELIPSRRVAMNDNAEVEHPAHILAYYSLAGPRKDFPDTVIPLDPAAYVKDEDN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01200 607 Gene3D Ribonuclease Inhibitor 66 600 IPR032675 -
Arst7g01200 607 FunFam Coronatine-insensitive protein 1 66 599 - -
Arst7g01200 607 Pfam Transport inhibitor response 1 protein domain 86 132 IPR041101 -
Arst7g01200 607 SUPERFAMILY F-box domain 17 66 IPR036047 GO:0005515
Arst7g01200 607 Pfam F-box 27 67 IPR041567 -
Arst7g01200 607 Gene3D - 15 65 - -
Arst7g01200 607 SMART LRR_CC_2 150 175 IPR006553 -
Arst7g01200 607 SMART LRR_CC_2 498 523 IPR006553 -
Arst7g01200 607 SMART LRR_CC_2 352 375 IPR006553 -
Arst7g01200 607 SMART LRR_CC_2 328 351 IPR006553 -
Arst7g01200 607 SMART LRR_CC_2 446 472 IPR006553 -
Arst7g01200 607 CDD F-box_AtTIR1-like 28 65 - -
Arst7g01200 607 SUPERFAMILY RNI-like 118 545 - -
Arst7g01200 607 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 30 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01200 Arst-Chr7 11270463 11274704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01200 K13463 - gmx:100793081 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g01200 7 11270463 11274704 Arst7g01200 7 11270463 11274704 ECH
Arst10g01485 10 26569189 26572730 Arst7g01200 7 11270463 11274704 PCT