Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01485 ATGGAGGAAAGGAGCGTGAGGAGGACGCGCCAGGTGGACGTGGTGATGGACTGCGTGATTCCGTACATCGATGACCCGAAAGACCGCGACGCCGTGTCTCAGGTGTGTCGGCGGTGGTACGAGCTCGATTCCATGACACGTAAGCACGTCACCATCGCGCTATGCTACACCACCACGCCGGACCGCCTCAGGCGGCGGTTCCCTCACCTGGAGTCTCTGAAGCTGAAGGGGAAGCCTAGGGCGGCGATGTTCAACCTCATACCGGAGGATTGGGGCGGTCACGTGACGCCTTGGGTGACGGAGATCTCGCAGCACTTTGGATGCCTCAGGAGCCTCCATTTCCGGCGCATGATTGTTAAGGACTCCGATCTTGAGGTTCTTGCTAAGTCACGTGGTCACGTGCTTCAAGCTCTGAAGCTTGATAAGTGTTCTGGTTTCTCCACAGATGGCCTTTTCTTTGTTGGCAGGTTTTGCAGGAATTTAAGAGTCTTGTTTTTGGAGGAAAGCACAATTGTTGAGAAAGATGGTGAATGGTTGCATGAGCTTGCTTTAAATAATACGGTTCTTGAGTCACTCAATTTTTACTTGACGGAAATTGCGGCTGTAGGAATTCAGGACCTTGAACTTATAGCCAAAAATTGCCCCAACTTAGTCTCCGTGAAAGTTACTGATTCCGAAATCTTGGATCTTGTGAACTTCTTTCGCTATGCTACTTCTCTAGAAGAATTTTGTGGAGGTGCCTATACTGAGGAACCAGATAGGTACAATGCTGTAACATTACCAGCCAGGTTATGCCGATTGGGTTTGACAAATATTGAAAGCAATGAGTTGCCAATGGTGTTTGTTTATGCATCCATACTAAAAAAGTTGGACCTCATGTATGCAATGCTGGATACAGAGGATCATTGCAAGTTAATTGAAAAGTGCCCCAATTTGGAAGTCCTCGAGTCAAGAAATGTAATTGGAGATAGAGGATTGGAGGTTCTTGCTCGCTGTTGTACAAAGTTAAAAAGGCTTAGGATTGATAGAGGTGATGATGATCAAGGAATGGAAGATGAAGATGGTGTTGTTTCCCATAGAGGATTAACTGCTTTGGCACAGGGATGTCCAAAACTCGAATATTTGGCTGTTTATGTATCTGACATCACAAATGCATGTTTGGAACAGATTGGGACTCACTTGAGAAACCTTTGTGATTTTCGCCTTGTCCTGCTTGATCATGAAGCAGAAATAACCGATTTGCCACTTGACAACGGAGTAAGGACTTTACTTATGGGTTGTAACAAGCTTAGAAGATTTGCTCTTTATCTCCGACCCGGGGGCTTGACCGACCAAGGTCTTGGCTACATTGGGCAATACAGCCAAAATGTAAGATGGATGCTACTTGGCTATGTTGGACAGTCCGATGCAGGGCTTTTGGAATTCTCTAAGGGCTGTCCGAATCTCCAGAAACTCGAAATGAGAGGCTGTTCCTTTTTTAGTGAGCGTGCACTAGCCATTGCTGCAATGCGCCTGGCTTCTCTTAGGTACTTGTGGGTGCAAGGCTATGGTGCCTCTTCTTCTGGACGCGATCTTTTGGCTATGGCTCGCCCCTTTTGGAATATCGAGTTGATTCCTTCTAGACATGTGGCGGTAAATAATAATCCGGAAATGCCAGTAATCATTGAGCATCCGGCTCACATTCTTGCATATTACTCTCTTGCGGGGCAAAGAGATGATTTTCCGGATAGCGTTGTACCTTTGGAATCCACGGTATGTGCATAA 1764 0.4666 MEERSVRRTRQVDVVMDCVIPYIDDPKDRDAVSQVCRRWYELDSMTRKHVTIALCYTTTPDRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWVTEISQHFGCLRSLHFRRMIVKDSDLEVLAKSRGHVLQALKLDKCSGFSTDGLFFVGRFCRNLRVLFLEESTIVEKDGEWLHELALNNTVLESLNFYLTEIAAVGIQDLELIAKNCPNLVSVKVTDSEILDLVNFFRYATSLEEFCGGAYTEEPDRYNAVTLPARLCRLGLTNIESNELPMVFVYASILKKLDLMYAMLDTEDHCKLIEKCPNLEVLESRNVIGDRGLEVLARCCTKLKRLRIDRGDDDQGMEDEDGVVSHRGLTALAQGCPKLEYLAVYVSDITNACLEQIGTHLRNLCDFRLVLLDHEAEITDLPLDNGVRTLLMGCNKLRRFALYLRPGGLTDQGLGYIGQYSQNVRWMLLGYVGQSDAGLLEFSKGCPNLQKLEMRGCSFFSERALAIAAMRLASLRYLWVQGYGASSSGRDLLAMARPFWNIELIPSRHVAVNNNPEMPVIIEHPAHILAYYSLAGQRDDFPDSVVPLESTVCA 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01485 587 Pfam Transport inhibitor response 1 protein domain 68 114 IPR041101 -
Arst10g01485 587 CDD F-box_AtTIR1-like 13 47 - -
Arst10g01485 587 SMART LRR_CC_2 479 504 IPR006553 -
Arst10g01485 587 SMART LRR_CC_2 309 332 IPR006553 -
Arst10g01485 587 SMART LRR_CC_2 427 453 IPR006553 -
Arst10g01485 587 SMART LRR_CC_2 369 393 IPR006553 -
Arst10g01485 587 FunFam Coronatine-insensitive protein 1 48 584 - -
Arst10g01485 587 SUPERFAMILY RNI-like 268 526 - -
Arst10g01485 587 SUPERFAMILY RNI-like 86 342 - -
Arst10g01485 587 Pfam F-box 11 49 IPR041567 -
Arst10g01485 587 Gene3D - 1 47 - -
Arst10g01485 587 Gene3D Ribonuclease Inhibitor 48 585 IPR032675 -
Arst10g01485 587 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 27 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01485 Arst-Chr10 26569189 26572730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01485 K13463 - gmx:732662 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01485 10 26569189 26572730 Arst10g01485 10 26569189 26572730 ECH
Arst10g01485 10 26569189 26572730 Arst7g01200 7 11270463 11274704 PCT