Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g01053 ATGGGGGATAATTTGGAAAAAGGGCAGGATTACGAACAGAAAGCAGAGAAGAAGCTCGGTGGTTGGGGATTGTTTGGTTCCAAATTCGACGATGCTGCAGACCTATTCGAAAGAGCCGCTAATTGCTACAAGCTCGCAAAATCTTGGGATAAAGCAGGAGCCACCTATGTGAAGTTGGCAAATTGCCATATCAAGTTGGATAGCAAACATGAAGCTGCCGGTGCCTATGTTGATGCAGCACATAGTTACAAAAAAGTTAATATAAGTGAGGCTGTATCTTGCTTAGACCAAGCTGTAAATCTTTTCTGTGAAATTGGAAGAATCACTATGGCAGCTAAATATTTGAAGGAAATTGCGGAGTTGTATGAATCTGAACAGAACATTGAGCAGGCCATTGCTTACTATGAAAAGTCTGCTGACTTTTATGAAAATGAAGAAGGGACAACTTCTGCAAACCAGTGCAAGGCAAAAGTTGCTCAATTTGCTTCTCAACTAGAACAATACCAGAAGGCAATTGAGATTTACGAAGACATAGCACGCCAATCTCTCAACAATAATTTGCTGAAATATGGAGCTAGAGGGCATCTTCTTAATGCCGGCATTTGCCAACTTTGCAAGGGAGACGTTGTCGCTATCACCAATGCGTTGGAGCGATATCAGGAGATGGATCCAACATTTGGAGGCACACGTGAATATAGACTATTGGCGAATATTGCTTCCGCGATGGATGAAGAAGATGTCACAAAATTTACCGAAGTTATCAAGGAATTCGATAGCATGAGCCCTCTGGATTCATTGAAGACAACGCTTCTTTTGAGGGTGAAGGAAAAGCTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACTTAA 870 0.4184 MGDNLEKGQDYEQKAEKKLGGWGLFGSKFDDAADLFERAANCYKLAKSWDKAGATYVKLANCHIKLDSKHEAAGAYVDAAHSYKKVNISEAVSCLDQAVNLFCEIGRITMAAKYLKEIAELYESEQNIEQAIAYYEKSADFYENEEGTTSANQCKAKVAQFASQLEQYQKAIEIYEDIARQSLNNNLLKYGARGHLLNAGICQLCKGDVVAITNALERYQEMDPTFGGTREYRLLANIASAMDEEDVTKFTEVIKEFDSMSPLDSLKTTLLLRVKEKLKAKELEEDDLT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g01053 289 Pfam Soluble NSF attachment protein, SNAP 7 278 - -
Arst7g01053 289 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 8 279 IPR000744 GO:0006886
Arst7g01053 289 PRINTS NSF attachment protein signature 255 275 IPR000744 GO:0006886
Arst7g01053 289 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Arst7g01053 289 PRINTS NSF attachment protein signature 119 136 IPR000744 GO:0006886
Arst7g01053 289 PRINTS NSF attachment protein signature 152 175 IPR000744 GO:0006886
Arst7g01053 289 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
Arst7g01053 289 PRINTS NSF attachment protein signature 224 244 IPR000744 GO:0006886
Arst7g01053 289 PRINTS NSF attachment protein signature 183 202 IPR000744 GO:0006886
Arst7g01053 289 Coils Coil 151 185 - -
Arst7g01053 289 FunFam Alpha-soluble NSF attachment protein-like 6 285 - -
Arst7g01053 289 Gene3D Tetratricopeptide repeat domain 6 288 IPR011990 GO:0005515
Arst7g01053 289 CDD SNAP 7 278 IPR000744 GO:0006886
Arst7g01053 289 ProSiteProfiles TPR repeat profile. 112 145 IPR019734 GO:0005515
Arst7g01053 289 SUPERFAMILY TPR-like 6 280 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g01053 Arst-Chr7 8603683 8611585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g01053 K15296 - gmx:100812517 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01272 10 17133818 17138426 Arst7g01053 7 8603683 8611585 ECH
Arst7g01053 7 8603683 8611585 Arst7g01053 7 8603683 8611585 ECH
Arst10g01272 10 17133818 17138426 Arst7g01053 7 8603683 8611585 PCT