Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03585 ATGGGGTGTGGAAAACTGAAGAGGTTTCTTGTTATGGTGTTGTTCATTGAACTTTTGGTGTGCTCAGTGGTGAGTGGAATTGGTGTTAACTGGGGAACACAAGCAACACACCCTTTGCCACCATCAACAGTGGTGAAAATGCTAAAAGACAATGGTATTCAGAAAGTGAAGCTTTTTGATGCTGACTCAAATATCTTAGAGGCTCTTAAGAAGACTCAGATCCAAGTCATGGTTGGTATCCCAAATGACATGCTTTACACACTTGCTAACAGTGTTCAAGCTGCTGAAAAATGGGTCTCAAAGAATATCTCAGCTCATATCTCATCTGGTGGAGTAGACATCAGGTATGTCGCCGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGAACGTTCGAGTCCACAACCCTTCCGGCTCTTCAAAACATCCAATCAGCTCTTGTGAAGGCTGGTTTGGGCAACAGGGTTAAAGTCACCACCCCTTTAAATGCTGATGTGTATCAAAGTTCGTCGGATAAACCTTCCGACGGAGACTTCAGGACAGACATCCATGATCTCATGATAAAAATTGTCAGTTTCTTGAGCCAGAACAATGCTCCATTCACTGTAAACATCTACCCTTTCATCAGCCTCTACGCGGATCCCAACTTCCCAATGGACTATGCCTTCTTCAATGGCTTCTCGAGTGCTATAAACGACAATGGAAAGATCTATGACAATGTGTTTGATGCTAACCATGATACTCTAGTATGGGCATTGCAGAAGAATGGCTTCGGAAACCTGCCCATTATTGTCGGAGAGATTGGGTGGCCTACAGATGGGGACCGGAATGCGAACCTTCAATACGCCCAACGCTTCAACCAAGGCTTCACGTCTAGATATCTTGGCGGAAAAGGTACCCCAATGAGGCCGGGTCCGATCGATGCCTACCTATTTAGCCTCATAGATGAAGACAGCAAAAGCATTCAGCCAGGTAACTTCGAACGCCATTGGGGATTGTTTTACTACGACGGAAAGCCAAAGTACCAACTCAGCCTTGGACCGACAAGTCCGAACGGCTTGGTAGCTGCTAGTGGCGTCGCATATCTTCCTAAAAAGTGGTGTATTATGAAGCCTTCGGCGAACCTCAACAGCGACCAAGTTGCGCCGAGTGTGTCTTATGCGTGCCAAAATGCTGATTGCACTAGTCTTGGATATGGAACTTCATGTGGAAATTTGGATGTTCAAGGTAACATATCTTATGCATTTAATAGCTATTTTCAGGTGAATGATCAAATGGACAGTGCATGCAAATTTCCTGGACTTTCTGTTGTCACCGAGAGAGATCCTTCAGTGGGTGATTGCAAATTCAAAATCATGATCCAGACAGATTCTGCTGTCAGAATTGGTTCTGTTAGAATATTGCTATTTGTATTCTTGTTTTTAGGTATTGTTGTGTAA 1440 0.4403 MGCGKLKRFLVMVLFIELLVCSVVSGIGVNWGTQATHPLPPSTVVKMLKDNGIQKVKLFDADSNILEALKKTQIQVMVGIPNDMLYTLANSVQAAEKWVSKNISAHISSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALVKAGLGNRVKVTTPLNADVYQSSSDKPSDGDFRTDIHDLMIKIVSFLSQNNAPFTVNIYPFISLYADPNFPMDYAFFNGFSSAINDNGKIYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFTSRYLGGKGTPMRPGPIDAYLFSLIDEDSKSIQPGNFERHWGLFYYDGKPKYQLSLGPTSPNGLVAASGVAYLPKKWCIMKPSANLNSDQVAPSVSYACQNADCTSLGYGTSCGNLDVQGNISYAFNSYFQVNDQMDSACKFPGLSVVTERDPSVGDCKFKIMIQTDSAVRIGSVRILLFVFLFLGIVV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03585 479 FunFam Glucan endo-1,3-beta-glucosidase 8 362 459 - -
Arst6g03585 479 Pfam Glycosyl hydrolases family 17 27 345 IPR000490 GO:0004553|GO:0005975
Arst6g03585 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 439 IPR044965 GO:0004553|GO:0005975
Arst6g03585 479 Gene3D - 363 459 - -
Arst6g03585 479 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Arst6g03585 479 Gene3D Glycosidases 26 349 - -
Arst6g03585 479 SMART X8_cls 366 450 IPR012946 -
Arst6g03585 479 FunFam Glucan endo-1,3-beta-glucosidase 5 26 352 - -
Arst6g03585 479 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Arst6g03585 479 Pfam X8 domain 366 435 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03585 Arst-Chr6 103738664 103742210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03585 9 475 Glycoside Hydrolase AT4G31140 69.118 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03585 K19893 - gmx:100775918 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03585 6 103738664 103742210 Arst10g02182 10 75970966 75972707 PCT
Arst8g03352 8 44462847 44465813 Arst6g03585 6 103738664 103742210 PCT