Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02182 ATGGCTCAAACAAAACGCATGCTATGGGTGTCTTGTTTGATCTTTGTCTTAGTTCAATGCCATCTACCAAGTGCAAAATGCTCACATGCTTTGTCAAATGTTGGCATAAACTGGGGTGCATTGACATCTCACCCTATAAATCCTTATACTGTTGTTGATCTCTTGAAAGACAACGGAATCAAGAAAGTTAAATTGTTCGATGTAGATTCCTGGACACTGGGTGCTCTTGCTGGTTCAGGCATTGAAGTCATGATTGGTATCCCTAATGACCAAATGGAAAGGCTTTCTAACAGTGGCCAGGCTGAGCAATGGGTCAAGCAAAATCTCACCAAACATCTACATGGTGGTGTTGACATCAGATACATATCTGTTGGAAACGAGCCTTTCTTGGCGAGCTATGAAAACAAGTATAGAAGTTCTACATTCCCAGCAATGAAGAGTATTCAGAAAGCTGTTGAGAAGGCAGGAGTTGCAGACCAAGTTAAGGTTACTTCGTGTTTGAATGCCGATGTGTTAGATTCAGGTTCGGACAAGCCCTCGGACGGACAGTTTCGAAGTGACATCAAAGATGTGATGAAAGAAATACTCCAATTCCTTAACGACAATAACTCACCCTTCTTCATCAACATATATCCTTACCTTAGCCTTTATTTGAATCCAAATTTTCCAGAAGAACTGGCATTCTTTGACGCAGGTAGATCATTCGAAGACAAGGGTGCAACTTACACAAATGTGTTTGATGCAAGTGTAGATACCCTTGTTTGGGCACTAAAGAAGGAGGGCTACTCTGACATGAAAATCGTTGTTGGCGAAGTTGGATGGCCGACGGATGGCCACAAAAGCGCCAACAAAGATAAAGCAAGAAGATTCTACCATGGATTCCTTAAGAAACTAGGAAACCAACAAGGAAGCCCTCTTCATCCTGGAGTCTTGGATGTGTATCTCTTTGGTCTTTTCGATGAGAATCTCAAGAGCATTGAACCCGGAAAGTTTGAGCGTCATTGGGGAATTTTCGAATACGATGGGAAGCCCAAGTTCCCTGTAGATTTCTCTGGTAAAGGAGAAGATCATAAATGGCCAGTGGGAGCAAAAGGGGTAAGATACCTAGAGAAGCAATGGTGTGTGTTAAGCGAAGATGTTAAAGAATTTAGTGGTCCTGTTTATGAGGCATTAGGGTATGCATGTGCAAATACTGATTGTACAAGCTTAGGATATGGTTGTTCTTGTGCCGATTTGGATATTCGTGGCAATGTTTCTTATGCTTTTAATCAATACTTTCAAGCAAGGGATCAAAGCATTGAGGCATGTGATTTCGATGGACTGGCGGAAATTGTAACAAGTGATCCATCAAAAGGGACTTGTAAGTTCCCAATAGTCATTGAGAGTGCTGCAACTTCTCTTAAGACACATGATGCAATAATCCATATCCTTCTTCTTGGCTTCGCTCTATTTTTTGTGACGTTTATGTGA 1470 0.4156 MAQTKRMLWVSCLIFVLVQCHLPSAKCSHALSNVGINWGALTSHPINPYTVVDLLKDNGIKKVKLFDVDSWTLGALAGSGIEVMIGIPNDQMERLSNSGQAEQWVKQNLTKHLHGGVDIRYISVGNEPFLASYENKYRSSTFPAMKSIQKAVEKAGVADQVKVTSCLNADVLDSGSDKPSDGQFRSDIKDVMKEILQFLNDNNSPFFINIYPYLSLYLNPNFPEELAFFDAGRSFEDKGATYTNVFDASVDTLVWALKKEGYSDMKIVVGEVGWPTDGHKSANKDKARRFYHGFLKKLGNQQGSPLHPGVLDVYLFGLFDENLKSIEPGKFERHWGIFEYDGKPKFPVDFSGKGEDHKWPVGAKGVRYLEKQWCVLSEDVKEFSGPVYEALGYACANTDCTSLGYGCSCADLDIRGNVSYAFNQYFQARDQSIEACDFDGLAEIVTSDPSKGTCKFPIVIESAATSLKTHDAIIHILLLGFALFFVTFM 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02182 489 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Arst10g02182 489 SMART X8_cls 372 456 IPR012946 -
Arst10g02182 489 Gene3D Glycosidases 32 358 - -
Arst10g02182 489 Gene3D - 368 469 - -
Arst10g02182 489 FunFam Glucan endo-1,3-beta-glucosidase 8 368 465 - -
Arst10g02182 489 FunFam Glucan endo-1,3-beta-glucosidase 5 33 356 - -
Arst10g02182 489 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 444 IPR044965 GO:0004553|GO:0005975
Arst10g02182 489 SUPERFAMILY (Trans)glycosidases 34 350 IPR017853 -
Arst10g02182 489 Pfam Glycosyl hydrolases family 17 34 350 IPR000490 GO:0004553|GO:0005975
Arst10g02182 489 Pfam X8 domain 372 442 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02182 Arst-Chr10 75970966 75972707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02182 35 470 Miscellaneous Gene Families AT5G64790 53.303 1.64e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02182 - - gmx:100794658 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02182 10 75970966 75972707 Arst10g02182 10 75970966 75972707 ECH
Arst6g03585 6 103738664 103742210 Arst10g02182 10 75970966 75972707 PCT