Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02108 ATGCGGAGTTTCGTCGCCGTGTTGCTGGCCTTAACTGCTTTGGTGACGGCGGTGCCGGCAACGGTGGTGCTTCCGGGGAGCTATCTTCCCCTGGAACGCACCATTCCCCTGAACCGTCGCATGGAGCCGGAGGCGCTGAGAGCTCGCGACAGAGCACGCCACGCTCGAATCTTGCAAGGCGCAACTGTTGCCGGCGTTGTCGACTTCTCAGTCCAAGGAACCTCCGATCCTTACTTCGTTGGATTGTACTTTACAAAAGTGAAGATGGGTTCTCCTCCGAAGGAATTTAATGTCCAGATTGATACTGGGAGTGACATCTTGTGGGTTAATTGCAACAGATGCAGTAATTGTCCACAGTCTAGCGGGCTGGGGACCCAGCTCAATTTCTTTGATGCAGCCAGCTCATCCACTGCTGCACTGGTTTCCTGCTCGGACCCGATATGCACTTATGCGGTTCAAACTGCAACAAGTGAATGCTCCTCTCAGGTTAACCAGTGCAGCTACACCTTTCAGTATGGAGATGGAAGTGGCACAACCGGATATTATGTTTCCGATGCTATCTATCTTGACACGATTGTGGGACAATCTGTGCTTTCTAACTCATCATCTACCATCGTTTTTGGGTGTAGCACCTATCAATCTGGAGATTTGACTAAGACAGAAAAAGCAGTTGACGGAATTTTTGGATTTGGACCTGGTGCTCTATCTGTTATATCGCAGTTGTCATCGAAAGGCATGACCCCCAAAGTTTTCTCGCATTGCTTAAAAGGAGATGGCAATGGAGGAGGCATACTAGTTCTTGGTGAGATATTGGAGCCTGGCATTGTTTATACTCCACTTGTCCCATCACAGCCCCATTACAACTTAAATCTTGAGAGTATTGCTGTCAACGGACAGCTCCTCTCAATTGATCCAGCTGCATTTGGAACATCTAACAATCGGGGAACCATAGTTGACTCTGGTACAACATTGGCATACCTTATTCAAGAAGCTTATGATCCATTTGTCAATGCTATAACTACAACTGTGTCACAGTTTGCCAGACCCATTATTTCTAAAGGAAACCAGTGCTATCTGGTCCCAACCAGCATAGGTGATATATTTCCTTCAGTCACTTTAAACTTTATTGGTGGAGCATCCATGGTTCTGAAACCAGAACAATACCTTATGCATTATGGTTTTCTTGATGGTGCTGCAATGTGGTGCATGGGTTTCCAGAAAGTGCAGGAGGGATTCACAATTTTAGGAGATCTTGTGCTGAAAGATAAGATTTTTGTATATGACTTGGCTAATGAGCGTATTGGATGGACAAACTATGACTGTTCCTTATCAGTAAACGTCTCAGTGGCTGCAACCAAGAGCAAAGATCAGTACATCAATGCAGGAACGCCGAGTGTCAGCAGCTCCCTCATAGGCCATGTGTACAAGTTACTACCTGTAAGCATTGTGGTTCTCCTTGTCCACATGATAGTTTCCATGGTGCCCCCAATTTCGTGA 1497 0.4643 MRSFVAVLLALTALVTAVPATVVLPGSYLPLERTIPLNRRMEPEALRARDRARHARILQGATVAGVVDFSVQGTSDPYFVGLYFTKVKMGSPPKEFNVQIDTGSDILWVNCNRCSNCPQSSGLGTQLNFFDAASSSTAALVSCSDPICTYAVQTATSECSSQVNQCSYTFQYGDGSGTTGYYVSDAIYLDTIVGQSVLSNSSSTIVFGCSTYQSGDLTKTEKAVDGIFGFGPGALSVISQLSSKGMTPKVFSHCLKGDGNGGGILVLGEILEPGIVYTPLVPSQPHYNLNLESIAVNGQLLSIDPAAFGTSNNRGTIVDSGTTLAYLIQEAYDPFVNAITTTVSQFARPIISKGNQCYLVPTSIGDIFPSVTLNFIGGASMVLKPEQYLMHYGFLDGAAMWCMGFQKVQEGFTILGDLVLKDKIFVYDLANERIGWTNYDCSLSVNVSVAATKSKDQYINAGTPSVSSSLIGHVYKLLPVSIVVLLVHMIVSMVPPIS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02108 498 Gene3D Acid Proteases 66 269 IPR021109 -
Arst6g02108 498 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Arst6g02108 498 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Arst6g02108 498 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Arst6g02108 498 CDD pepsin_A_like_plant 83 441 IPR034161 -
Arst6g02108 498 Gene3D Acid Proteases 270 447 IPR021109 -
Arst6g02108 498 FunFam Aspartic proteinase-like protein 2 66 269 - -
Arst6g02108 498 PANTHER ASPARTYL PROTEASES 17 435 IPR001461 GO:0004190|GO:0006508
Arst6g02108 498 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
Arst6g02108 498 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
Arst6g02108 498 SUPERFAMILY Acid proteases 78 444 IPR021109 -
Arst6g02108 498 FunFam Aspartic proteinase-like protein 2 270 448 - -
Arst6g02108 498 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02108 Arst-Chr6 48165251 48169356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02108 67 442 Miscellaneous Gene Families AT1G44130 28.392 5.34e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02108 - - gmx:100804147 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02108 6 48165251 48169356 Arst6g02108 6 48165251 48169356 ECH
Arst6g02108 6 48165251 48169356 Arst6g02107 6 48165251 48169356 PCT