Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02107 ATGCGGAGTTTCGTCGCCGTGTTGCTGGCCTTAACTGCTTTGGTGACGGCGGTGCCGGCAACGGTGGTGCTTCCGGGGAGCTATCTTCCCCTGGAACGCACCATTCCCCTGAACCGTCGCATGGAGCCGGAGGCGCTGAGAGCTCGCGACAGAGCACGCCACGCTCGAATCTTGCAAGGCGCAACTGTTGCCGGCGTTGTCGACTTCTCAGTCCAAGGAACCTCCGATCCTTACTTCGTTGGGTACGGATTGTACTTTACAAAAGTGAAGATGGGTTCTCCTCCGAAGGAATTTAATGTCCAGATTGATACTGGGAGTGACATCTTGTGGGTTAATTGCAACAGATGCAGTAATTGTCCACAGTCTAGCGGGCTGGGGACCCAGCTCAATTTCTTTGATGCAGCCAGCTCATCCACTGCTGCACTGGTTTCCTGCTCGGACCCGATATGCACTTATGCGGTTCAAACTGCAACAAGTGAATGCTCCTCTCAGGTTAACCAGTGCAGCTACACCTTTCAGTATGGAGATGGAAGTGGCACAACCGGATATTATGTTTCCGATGCTATCTATCTTGACACGATTGTGGGACAATCTGTGCTTTCTAACTCATCATCTACCATCGTTTTTGGGTGTAGCACCTATCAATCTGGAGATTTGACTAAGACAGAAAAAGCAGTTGACGGAATTTTTGGATTTGGACCTGGTGCTCTATCTGTTATATCGCAGTTGTCATCGAAAGGCATGACCCCCAAAGTTTTCTCGCATTGCTTAAAAGGAGATGGCAATGGAGGAGGCATACTAGTTCTTGGTGAGATATTGGAGCCTGGCATTGTTTATACTCCACTTGTCCCATCACAGCCCCATTACAACTTAAATCTTGAGAGTATTGCTGTCAACGGACAGCTCCTCTCAATTGATCCAGCTGCATTTGGAACATCTAACAATCGGGGAACCATAGTTGACTCTGGTACAACATTGGCATACCTTATTCAAGAAGCTTATGATCCATTTGTCAATGCTATAACTACAACTGTGTCACAGTTTGCCAGACCCATTATTTCTAAAGGAAACCAGTGCTATCTGGTCCCAACCAGCATAGGTGATATATTTCCTTCAGTCACTTTAAACTTTATTGGTGGAGCATCCATGGTTCTGAAACCAGAACAATACCTTATGCATTATGGTTTTCTTGATGGTGCTGCAATGTGGTGCATGGGTTTCCAGAAAGTGCAGGAGGGATTCACAATTTTAGGAGATCTTGTGCTGAAAGATAAGATTTTTGTATATGACTTGGCTAATGAGCGTATTGGATGGACAAACTATGACTGTTCCTTATCAGTAAACGTCTCAGTGGCTGCAACCAAGAGCAAAGATCAGTACATCAATGCAGGAACGCCGAGTGTCAGCAGCTCCCTCATAGGCCATGTGTACAAGTTACTACCTGTAAGCATTGTGGTTCTCCTTGTCCACATGATAGTTTCCATGGTGCCCCCAATTTCGTGA 1503 0.4651 MRSFVAVLLALTALVTAVPATVVLPGSYLPLERTIPLNRRMEPEALRARDRARHARILQGATVAGVVDFSVQGTSDPYFVGYGLYFTKVKMGSPPKEFNVQIDTGSDILWVNCNRCSNCPQSSGLGTQLNFFDAASSSTAALVSCSDPICTYAVQTATSECSSQVNQCSYTFQYGDGSGTTGYYVSDAIYLDTIVGQSVLSNSSSTIVFGCSTYQSGDLTKTEKAVDGIFGFGPGALSVISQLSSKGMTPKVFSHCLKGDGNGGGILVLGEILEPGIVYTPLVPSQPHYNLNLESIAVNGQLLSIDPAAFGTSNNRGTIVDSGTTLAYLIQEAYDPFVNAITTTVSQFARPIISKGNQCYLVPTSIGDIFPSVTLNFIGGASMVLKPEQYLMHYGFLDGAAMWCMGFQKVQEGFTILGDLVLKDKIFVYDLANERIGWTNYDCSLSVNVSVAATKSKDQYINAGTPSVSSSLIGHVYKLLPVSIVVLLVHMIVSMVPPIS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02107 500 Gene3D Acid Proteases 272 449 IPR021109 -
Arst6g02107 500 Pfam Xylanase inhibitor C-terminal 288 439 IPR032799 -
Arst6g02107 500 CDD pepsin_A_like_plant 85 443 IPR034161 -
Arst6g02107 500 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Arst6g02107 500 PRINTS Pepsin (A1) aspartic protease family signature 318 329 IPR001461 GO:0004190|GO:0006508
Arst6g02107 500 PRINTS Pepsin (A1) aspartic protease family signature 415 430 IPR001461 GO:0004190|GO:0006508
Arst6g02107 500 FunFam Aspartic proteinase-like protein 2 272 450 - -
Arst6g02107 500 Pfam Xylanase inhibitor N-terminal 85 270 IPR032861 -
Arst6g02107 500 FunFam Aspartic proteinase-like protein 2 66 271 - -
Arst6g02107 500 SUPERFAMILY Acid proteases 80 446 IPR021109 -
Arst6g02107 500 ProSiteProfiles Peptidase family A1 domain profile. 85 439 IPR033121 -
Arst6g02107 500 PANTHER ASPARTYL PROTEASES 17 437 IPR001461 GO:0004190|GO:0006508
Arst6g02107 500 Gene3D Acid Proteases 68 271 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02107 Arst-Chr6 48165251 48169356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02107 83 444 Miscellaneous Gene Families AT1G44130 28.385 8.80e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02107 - - gmx:100804147 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02107 6 48165251 48169356 Arst6g02107 6 48165251 48169356 ECH
Arst6g02108 6 48165251 48169356 Arst6g02107 6 48165251 48169356 PCT