Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01111 ATGGGATCCGAAAGAGGGTCTCCATTTTATGTGGTTGACTTAAGAGATGAAAACATGAAGCCGGGCAGCGAGGCATGGCGGTCGGCGTGCCGTGTGGTGAGGACTGCGCTGGAGGAGCACGGCTGCTTCGTGGCGCGGTTCGACAAGGTTAGCCAGGAGCTTTGCAACTCCGTTGTGACGTCTTTGAAGCAACTGTTTAGCCTGCCATTGGAGCTCAAGAAACAAAAGACAAATGATAAGCCATTACATGGCTACATAGGAAGTGTGCCATGGCTTCCATTGTATGAATCGATCGGCATTGATAATCCTTTGTCCATGGATGCAGTGCGAAATTTCGCCCACTTTATGTGGCCCCATGGAAACCATACTTTTTGTGAAAGCATCAATGAGTATGCGAAAGTGATGGCAGAATTAGAGGTAGTGGCAAGGAGAATGGTGTTTGAGAGCTATTATGATATGAAGATGGAACGATGCGAATCATTGATAGAAGAAACAAGCGAGTATGTGTTTCGTTGCTTGGAGTACAAGCCACGAAGCGAGGGCGTAGATGAGAATGTGTTAGGGTTGGAGCCTCACACTGACTTGTCAATCATATCAGTGCTTCATCCCATTAACAATCTCAATGGCTTGCAAGTTAAGACCAGCCATGATTCTGATGATCAAGAACAATGGACAGCCATTGAAGCCTCCCCCAACTCCTTTGTCGTCATGGCTGGTGACGCACTCCAGGTGTGGAGTAATGGAAGGATAAAATCATGTTTACACAGAGTAGAAATGAAGGAGAAGAAAGCAAGATACGCAACAGGAATATTCTCATTTTGTGGCAACATATTGGAGATACCAGAGGAAATAATGGTTGATGAAGAACACCCCTTGCGTTACAAACCAGCATTCCACCATTATGATTACCTTCGATTCTTTGACCAGCACAGAATCAGACAACCTCAAACTCGAATAAATGCCTATTGTGGAATATAA 978 0.4519 MGSERGSPFYVVDLRDENMKPGSEAWRSACRVVRTALEEHGCFVARFDKVSQELCNSVVTSLKQLFSLPLELKKQKTNDKPLHGYIGSVPWLPLYESIGIDNPLSMDAVRNFAHFMWPHGNHTFCESINEYAKVMAELEVVARRMVFESYYDMKMERCESLIEETSEYVFRCLEYKPRSEGVDENVLGLEPHTDLSIISVLHPINNLNGLQVKTSHDSDDQEQWTAIEASPNSFVVMAGDALQVWSNGRIKSCLHRVEMKEKKARYATGIFSFCGNILEIPEEIMVDEEHPLRYKPAFHHYDYLRFFDQHRIRQPQTRINAYCGI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01111 325 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 275 IPR005123 -
Arst6g01111 325 Pfam 2OG-Fe(II) oxygenase superfamily 175 268 IPR044861 -
Arst6g01111 325 SUPERFAMILY Clavaminate synthase-like 11 310 - -
Arst6g01111 325 Gene3D - 10 323 IPR027443 -
Arst6g01111 325 Pfam non-haem dioxygenase in morphine synthesis N-terminal 23 87 IPR026992 -
Arst6g01111 325 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 304 - -
Arst6g01111 325 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01111 Arst-Chr6 10170855 10173382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01111 186 295 Glycosyltransferase AT5G59530 31.304 2.80e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01111 - - gmx:100775440 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01110 6 10163102 10165321 Arst6g01111 6 10170855 10173382 PCT