Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01110 ATGGGATCACAAACAAGAGTGTGTCCATTTCCTGTAATTGATTTGAGCGATGAAAAGATGAAGGCAGGCACGGAGGCATGGGTGTCGGCGTGCCGTGTGGCGAGGACAGGGATGGAGGAGCACGGTTGTTTTGTGGTGAGGTTCGATAAGGTTGGGGAGTCGCTATGCAAGTGTGTTGTGTCAGCAATGGAGGAACTATTTGGTCTGCCAGTGGAAACAAAAGCACAGAAGACGAGTGAGAAGCTTTTTCATGGTTACTTGGGACAAGTATCCTGGATTCCCTTGTATGAATCTTTGGGCATTGATGACCCTTTCTCTATGCCTGCTTGCCAACACTTTGCAAACATAATGTGGCCTCAAGGCAATAACCGTTTCTGTGAAAGGATTAATGAGTATGCAAAGCTAATGGGGGAAATAGACCATATAGCAAAGAGGATGGTGTTTGAAAGCTACGGAGTGGACATGGAAAGATGCAAATTGATGATAGAATCAAGCGACTATCTGCTTCGATGCCAAGAATATAGGCCACCCAAGAACGATGAGGATGAAACAGGATTGCAGCCTCACACAGACTTAACCATCACATCAATAGTTCACCAACTCAACAATCTCAATGGCTTAGAAATCAAAGCCAGCGATGGAATCTGGAGAGGTGTTGATGCTTCTCCTTCTTCCTTTGTTGTCATGGCTGGTGATGCATTCAAGGTTTGGAGCAATGGTAGGATAAGGCCATGCGAACACAGAGTTACAGTGAGTAGTCATGTCAAGAATCTAAGATACTCTACGGGGCTCTTTTCTTTCTGCTCCAACACATTCGAGATTCCTCAGGAGTTGGTCAATCAACAACATCCCTTGCGTTACAAAACAACCTTCCACCATTATGATTATCTTCGCTTCTTTGATGAAAGCAAGATCAAAGATCTTGATACTCGGATTCAAGCCTATTGTGGAATCTCATCCAATCATGAATGA 972 0.4434 MGSQTRVCPFPVIDLSDEKMKAGTEAWVSACRVARTGMEEHGCFVVRFDKVGESLCKCVVSAMEELFGLPVETKAQKTSEKLFHGYLGQVSWIPLYESLGIDDPFSMPACQHFANIMWPQGNNRFCERINEYAKLMGEIDHIAKRMVFESYGVDMERCKLMIESSDYLLRCQEYRPPKNDEDETGLQPHTDLTITSIVHQLNNLNGLEIKASDGIWRGVDASPSSFVVMAGDAFKVWSNGRIRPCEHRVTVSSHVKNLRYSTGLFSFCSNTFEIPQELVNQQHPLRYKTTFHHYDYLRFFDESKIKDLDTRIQAYCGISSNHE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01110 323 Gene3D - 9 321 IPR027443 -
Arst6g01110 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 269 IPR005123 -
Arst6g01110 323 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 305 - -
Arst6g01110 323 Pfam 2OG-Fe(II) oxygenase superfamily 172 265 IPR044861 -
Arst6g01110 323 SUPERFAMILY Clavaminate synthase-like 6 300 - -
Arst6g01110 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 86 IPR026992 -
Arst6g01110 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01110 Arst-Chr6 10163102 10165321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01110 131 294 Glycosyltransferase AT5G59530 25.595 7.48e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01110 - - gmx:100775440 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01110 6 10163102 10165321 Arst6g01111 6 10170855 10173382 PCT
Arst6g01110 6 10163102 10165321 Arst6g01110 6 10163102 10165321 PCT